RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 RRP1P56182 461 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCNA1P78396 465 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PTH1RQ03431 593 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPARAQ07869 468 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ACVR2BQ13705 512 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 BAATQ14032 418 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADGRE1Q14246 886 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPNMBQ14956 572 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GRIN2CQ14957 1233 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC144BQ3MJ40 725 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 LRIT3Q3SXY7 679 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 HSP90AB4PQ58FF6 505 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 RRP12Q5JTH9 1297 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM240Q5SV17 173 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANKRD45Q5TZF3 282 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CXCL17Q6UXB2 119 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC30A10Q6XR72 485 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF365Q70YC5 407 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CYB5R4Q7L1T6 521 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARMCX2Q7L311 632 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PLEKHM2Q8IWE5 1019 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCAR1Q8IX12 1150 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FBXO16Q8IX29 292 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM133AQ8N9E0 248 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 NEDD1Q8NHV4 660 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CLEC4DQ8WXI8 215 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 APPBP2Q92624 585 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPKOWQ92917 476 aaPredicted RBP eCLIP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KHSRPQ92945 711 aaKnown RBP eCLIP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 WNT8BQ93098 351 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 MKL1Q969V6 931 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KIFC2Q96AC6 838 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SCLYQ96I15 445 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC17Q96LX7 622 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 NECAB3Q96P71 396 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CTAGE1Q96RT6 745 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLF1Q9BQI6 1058 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM47Q9BQJ4 181 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FSD1Q9BTV5 496 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPP1R12CQ9BZL4 782 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 LNPKQ9C0E8 428 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 UBA5Q9GZZ9 404 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRPV6Q9H1D0 765 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 UPF3AQ9H1J1 476 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 WNT8AQ9H1J5 351 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SEMA6BQ9H3T3 888 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 MROH8Q9H579 483 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KANSL2Q9H9L4 492 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 MKNK2Q9HBH9 465 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC38A10Q9HBR0 1119 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARHGEF10LQ9HCE6 1279 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CWC22Q9HCG8 908 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPCPD1Q9NPB8 672 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 A1CFQ9NQ94 594 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 XPNPEP3Q9NQH7 507 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPHNQ9NQX3 736 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 RNF146Q9NTX7 359 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GINM1Q9NU53 330 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOXC10Q9NYD6 342 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL20A1Q9P218 1284 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SWAP70Q9UH65 585 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZHX1Q9UKY1 873 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TBX21Q9UL17 535 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRR12Q9ULL5 1215 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GNEQ9Y223 722 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 YBX2Q9Y2T7 364 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SUPT16HQ9Y5B9 1047 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 IVNS1ABPQ9Y6Y0 642 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PLIN4Q96Q06 1357 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL4A3Q01955 1670 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYOFQ9NZM1 2061 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TECTAO75443 2155 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GREB1Q4ZG55 1949 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TICRRQ7Z2Z1 1910 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 A0A1W2PPC1 479 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 LCHNA4D1U4 455 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 B4E1Z4 1266 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARVCFO00192 962 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATP2A1O14983 1001 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DYNC1LI2O43237 492 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 B4GALT4O60513 344 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RANBP6O60518 1105 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DUSP11O75319 330 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 HMMRO75330 724 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GLRX3O76003 335 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RGS20O76081 388 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC25A27O95847 323 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTLL1O95922 423 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 TIMP1P01033 207 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 CLTBP09497 229 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 FGRP09769 529 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 C6orf222P0C671 652 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 HSPD1P10809 573 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 RARBP10826 455 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GSPT1P15170 499 aaKnown RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 DNAJB2P25686 324 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ALDH5A1P51649 535 aaPredicted RBP1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCL23P55773 120 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 GJA9P57773 515 aa1.91□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF200P98182 395 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms