RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 KDM4AO75164 1064 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 CLTBP09497 229 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 KCNA10Q16322 511 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 MUM1L1Q5H9M0 696 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
PNKP-225ENST00000636214 GPR153Q6NV75 609 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 DGKHQ86XP1 1220 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 ZKSCAN3Q9BRR0 538 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 KRT23Q9C075 422 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 CYP39A1Q9NYL5 469 aa21.03■□□□□ 0.96
PNKP-225ENST00000636214 ADD3Q9UEY8 706 aaKnown RBP21.03■□□□□ 0.96
PNKP-225ENST00000636214 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 DCDC2CA8MYV0 355 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 CST5P28325 142 aaPredicted RBP21.02■□□□□ 0.96
PNKP-225ENST00000636214 TNFAIP2Q03169 654 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 ZNF543Q08ER8 600 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 GNASQ5JWF2 1037 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 TTC22Q5TAA0 569 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 KLHDC9Q8NEP7 349 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 MPHOSPH6Q99547 160 aaKnown RBP21.02■□□□□ 0.96
PNKP-225ENST00000636214 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
PNKP-225ENST00000636214 MROH7Q68CQ1 1323 aa21.02■□□□□ 0.95
PNKP-225ENST00000636214 LTBP2Q14767 1821 aa21.01■□□□□ 0.95
PNKP-225ENST00000636214 SOWAHBA6NEL2 793 aa21.01■□□□□ 0.95
PNKP-225ENST00000636214 GJA9P57773 515 aa21.01■□□□□ 0.95
PNKP-225ENST00000636214 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
PNKP-225ENST00000636214 UBAC1Q9BSL1 405 aa21.01■□□□□ 0.95
PNKP-225ENST00000636214 RAD50Q92878 1312 aa21.01■□□□□ 0.95
PNKP-225ENST00000636214 B4E1Z4 1266 aa21■□□□□ 0.95
PNKP-225ENST00000636214 ZEB2O60315 1214 aa21■□□□□ 0.95
PNKP-225ENST00000636214 ASGR1P07306 291 aa21■□□□□ 0.95
PNKP-225ENST00000636214 RAG1P15918 1043 aa21■□□□□ 0.95
PNKP-225ENST00000636214 DEFB123Q8N688 67 aa21■□□□□ 0.95
PNKP-225ENST00000636214 PNMA1Q8ND90 353 aa21■□□□□ 0.95
PNKP-225ENST00000636214 BADQ92934 168 aa21■□□□□ 0.95
PNKP-225ENST00000636214 AP5M1Q9H0R1 490 aa21■□□□□ 0.95
PNKP-225ENST00000636214 UPF3AQ9H1J1 476 aaKnown RBP21■□□□□ 0.95
PNKP-225ENST00000636214 TMEM39AQ9NV64 488 aa21■□□□□ 0.95
PNKP-225ENST00000636214 ELP1O95163 1332 aa21■□□□□ 0.95
PNKP-225ENST00000636214 A0A0U1RQG5 324 aaPredicted RBP20.99■□□□□ 0.95
PNKP-225ENST00000636214 TRIM43BA6NCK2 446 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 MYADML2A6NDP7 307 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 SNHG28P0DPA3 235 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 BAATQ14032 418 aaPredicted RBP20.99■□□□□ 0.95
PNKP-225ENST00000636214 EEPD1Q7L9B9 569 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 SH3RF1Q7Z6J0 888 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 TLK2Q86UE8 772 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 FBXO16Q8IX29 292 aaPredicted RBP20.99■□□□□ 0.95
PNKP-225ENST00000636214 TRIM43Q96BQ3 446 aaPredicted RBP20.99■□□□□ 0.95
PNKP-225ENST00000636214 TOX2Q96NM4 488 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 ZSCAN10Q96SZ4 725 aaPredicted RBP20.99■□□□□ 0.95
PNKP-225ENST00000636214 VTA1Q9NP79 307 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 WDR19Q8NEZ3 1342 aa20.99■□□□□ 0.95
PNKP-225ENST00000636214 B4DLN1 442 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 DHX16O60231 1041 aaKnown RBP20.98■□□□□ 0.95
PNKP-225ENST00000636214 GOLGA8HP0CJ92 632 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 CALML3P27482 149 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
PNKP-225ENST00000636214 TRDNQ13061 729 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 RNF207Q6ZRF8 634 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 KATNBL1Q9H079 304 aa20.98■□□□□ 0.95
PNKP-225ENST00000636214 LOC102724159A0A0B4J2E5 919 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 NFIBO00712 420 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 TLR3O15455 904 aaKnown RBP20.97■□□□□ 0.95
PNKP-225ENST00000636214 ADCY6O43306 1168 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 PDE4AP27815 886 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 ALDH5A1P51649 535 aaPredicted RBP20.97■□□□□ 0.95
PNKP-225ENST00000636214 PWP2Q15269 919 aaKnown RBP20.97■□□□□ 0.95
PNKP-225ENST00000636214 IQSEC1Q6DN90 963 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 CCSAPQ6IQ19 270 aaPredicted RBP20.97■□□□□ 0.95
PNKP-225ENST00000636214 KIAA1211Q6ZU35 1233 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 ANKRD33Q7Z3H0 272 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 TNKSO95271 1327 aa20.97■□□□□ 0.95
PNKP-225ENST00000636214 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.96■□□□□ 0.95
PNKP-225ENST00000636214 KIAA0355O15063 1070 aa20.96■□□□□ 0.95
PNKP-225ENST00000636214 CABYRO75952 493 aa20.96■□□□□ 0.95
PNKP-225ENST00000636214 GSPT1P15170 499 aaKnown RBP20.96■□□□□ 0.95
PNKP-225ENST00000636214 FSCN1Q16658 493 aaKnown RBP20.96■□□□□ 0.95
PNKP-225ENST00000636214 USH1GQ495M9 461 aa20.96■□□□□ 0.95
PNKP-225ENST00000636214 ASPRV1Q53RT3 343 aa20.96■□□□□ 0.95
PNKP-225ENST00000636214 IFIT1BQ5T764 474 aaKnown RBP20.96■□□□□ 0.95
PNKP-225ENST00000636214 UBA5Q9GZZ9 404 aa20.96■□□□□ 0.95
PNKP-225ENST00000636214 LRRC37A2A6NM11 1700 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 ARVCFO00192 962 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
PNKP-225ENST00000636214 PARP1P09874 1014 aaKnown RBP20.95■□□□□ 0.94
PNKP-225ENST00000636214 BEX3Q00994 111 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 FPGSQ05932 587 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 PDE4DQ08499 809 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 ENAHQ8N8S7 591 aaPredicted RBP20.95■□□□□ 0.94
PNKP-225ENST00000636214 ZSWIM5Q9P217 1185 aa20.95■□□□□ 0.94
PNKP-225ENST00000636214 GNEQ9Y223 722 aaKnown RBP20.95■□□□□ 0.94
PNKP-225ENST00000636214 MYH6P13533 1939 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 SMPD1P17405 629 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 SHHQ15465 462 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 CDC37Q16543 378 aaPredicted RBP20.94■□□□□ 0.94
PNKP-225ENST00000636214 SLC30A10Q6XR72 485 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 Q7L0L9 218 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 MORC4Q8TE76 937 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms