RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 LDHBP07195 334 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TNNI1P19237 187 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ATP2B4P23634 1241 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 GJB2P29033 226 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 PEX26Q7Z412 305 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 B4GALNT2Q8NHY0 566 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 OXCT2Q9BYC2 517 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 SMYD2Q9NRG4 433 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 RAPGEF2Q9Y4G8 1499 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 LRRIQ3A6PVS8 624 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TK2O00142 265 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 EIF2S1P05198 315 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NNMTP40261 264 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MRPS15P82914 257 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MYSM1Q5VVJ2 828 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NUP85Q9BW27 656 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ING2Q9H160 280 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 KDM3AQ9Y4C1 1321 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TOMM70O94826 608 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TRIP4Q15650 581 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NCAPH2Q6IBW4 605 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 CFAP61Q8NHU2 1237 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MRFAP1L1Q96HT8 127 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ST7Q9NRC1 585 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 C6orf203Q9P0P8 240 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 MAP1BP46821 2468 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 CDC40O60508 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ERN1O75460 977 aaKnown RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 EXD1Q8NHP7 514 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NUDCD1Q96RS6 583 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 TRPV6Q9H1D0 765 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ZNF304Q9HCX3 659 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 CLCA2Q9UQC9 943 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 STK38LQ9Y2H1 464 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 NCOA2Q15596 1464 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 INHBAP08476 426 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 KRBA2Q6ZNG9 492 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 ST13P4Q8IZP2 240 aaPredicted RBP6.53□□□□□ -1.36
SCN1A-212ENST00000636194 PANK2Q9BZ23 570 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 SENP1Q9P0U3 644 aa6.53□□□□□ -1.36
SCN1A-212ENST00000636194 GOLGA8MH3BSY2 632 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 CYP7A1P22680 504 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 DDIT3P35638 169 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 ODR4Q5SWX8 454 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 AS3MTQ9HBK9 375 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 NDE1Q9NXR1 346 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SLC4A4Q9Y6R1 1079 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 KRT6AP02538 564 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 KRT6BP04259 564 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 KRT6CP48668 564 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 KRT76Q01546 638 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 KIAA2013Q8IYS2 634 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 NAPGQ99747 312 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 LARP6Q9BRS8 491 aaKnown RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 HPCAL4Q9UM19 191 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 CAB39Q9Y376 341 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 CACNA1FO60840 1977 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 HGSO14964 777 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 MAP2K2P36507 400 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SESN3P58005 492 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 RAB14P61106 215 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 PTGDRQ13258 359 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 CNGA2Q16280 664 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TTC17Q96AE7 1141 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TMEM245Q9H330 911 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 HECW1Q76N89 1606 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 H7C0S8 307 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SNUPNO95149 360 aaKnown RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 GCNT3O95395 438 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 ADAMTS2O95450 1211 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SAT1P21673 171 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SLC44A4Q53GD3 710 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TTC23LQ6PF05 361 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 BTN2A1Q7KYR7 527 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 CHMP1BQ7LBR1 199 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 SUPT20HQ8NEM7 779 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 IL1RAPL2Q9NP60 686 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 USTQ9Y2C2 406 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 NLRX1Q86UT6 975 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 RBM17Q96I25 401 aaKnown RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 MTRQ99707 1265 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TSSK1BQ9BXA7 367 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 C1orf112Q9NSG2 853 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 NFU1Q9UMS0 254 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 MYO1DO94832 1006 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 NCKAP1LP55160 1127 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 TTC19Q6DKK2 380 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 ZNF467Q7Z7K2 595 aaPredicted RBP6.52□□□□□ -1.37
SCN1A-212ENST00000636194 GLG1Q92896 1179 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 MMS19Q96T76 1030 aa6.52□□□□□ -1.37
SCN1A-212ENST00000636194 M0R2C6 588 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms