RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 CORO7P57737 925 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 ZNF445P59923 1031 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 AXDND1Q5T1B0 1012 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-211ENST00000635893 TDRD10Q5VZ19 366 aaKnown RBP5.79□□□□□ -1.48
SCN1A-211ENST00000635893 DCAF15Q66K64 600 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 PPFIBP1Q86W92 1011 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 TM9SF2Q99805 663 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 ADAM7Q9H2U9 754 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 GP6Q9HCN6 339 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 FHOD1Q9Y613 1164 aa5.79□□□□□ -1.48
SCN1A-211ENST00000635893 FBLN1P23142 703 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 KCNC1P48547 511 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 BICRALQ6AI39 1079 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 TMEM87AQ8NBN3 555 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 RGS22Q8NE09 1264 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 BRF1Q92994 677 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 FERD3LQ96RJ6 166 aa5.78□□□□□ -1.48
SCN1A-211ENST00000635893 SF3B6Q9Y3B4 125 aaKnown RBP5.78□□□□□ -1.48
SCN1A-211ENST00000635893 TBC1D8O95759 1140 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 ADRB1P08588 477 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 CD247P20963 164 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 SLURP1P55000 103 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 KRTAP10-2P60368 255 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 FOXO4P98177 505 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 FIBCD1Q8N539 461 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 RBBP8NLQ8NC74 664 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-211ENST00000635893 NLGN2Q8NFZ4 835 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 BORCS6Q96GS4 357 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 PTCHD1Q96NR3 888 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 FCRL3Q96P31 734 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-211ENST00000635893 RNF38Q9H0F5 515 aa5.77□□□□□ -1.49
SCN1A-211ENST00000635893 F8W031 263 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-211ENST00000635893 TP53P04637 393 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-211ENST00000635893 ITGA4P13612 1032 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 GUCY2CP25092 1073 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 PRR5P85299 388 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 NFKB2Q00653 900 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 POU4F1Q01851 419 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 VWA3BQ502W6 1294 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 LDLRAD1Q5T700 205 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 FNIP1Q8TF40 1166 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 SUSD2Q9UGT4 822 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 ZNF451Q9Y4E5 1061 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 HCFC2Q9Y5Z7 792 aa5.76□□□□□ -1.49
SCN1A-211ENST00000635893 A0A087WZG4 1122 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 CD3EP07766 207 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 ATF2P15336 505 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 L1CAMP32004 1257 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 ZNF76P36508 570 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 PLP2Q04941 152 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 TCEAL1Q15170 157 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 SPATS1Q496A3 300 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 ZFYVE27Q5T4F4 411 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 DBR1Q9UK59 544 aaKnown RBP5.75□□□□□ -1.49
SCN1A-211ENST00000635893 ZNF214Q9UL59 606 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-211ENST00000635893 DIS3Q9Y2L1 958 aaKnown RBP5.75□□□□□ -1.49
SCN1A-211ENST00000635893 FAN1Q9Y2M0 1017 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 PMF1-BGLAPU3KQ54 211 aa5.75□□□□□ -1.49
SCN1A-211ENST00000635893 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
SCN1A-211ENST00000635893 NCAM1P13591 858 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 IFNGR1P15260 489 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 TACR1P25103 407 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 EFEMP1Q12805 493 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 ZYXQ15942 572 aaKnown RBP5.74□□□□□ -1.49
SCN1A-211ENST00000635893 FBXW10Q5XX13 1052 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 LIPIQ6XZB0 460 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 SAPCD2Q86UD0 394 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 GGNQ86UU5 652 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 USP48Q86UV5 1035 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 LSRQ86X29 649 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-211ENST00000635893 RNF34Q969K3 372 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 BDH2Q9BUT1 245 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 NOL6Q9H6R4 1146 aaKnown RBP5.74□□□□□ -1.49
SCN1A-211ENST00000635893 FAM86C1Q9NVL1 165 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 PLA2G2DQ9UNK4 145 aa5.74□□□□□ -1.49
SCN1A-211ENST00000635893 PRICKLE3O43900 615 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-211ENST00000635893 HTRA3P83110 453 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 RTP5Q14D33 572 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 EEF1DP3Q658K8 133 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 RCSD1Q6JBY9 416 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 RUFY4Q6ZNE9 571 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 ZDHHC15Q96MV8 337 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 USP40Q9NVE5 1235 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 PPT2Q9UMR5 302 aa5.73□□□□□ -1.49
SCN1A-211ENST00000635893 SH3D21A4FU49 640 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 ASGR2P07307 311 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 GLI4P10075 376 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 UBXN11Q5T124 520 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 B3GNT8Q7Z7M8 397 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 CABP7Q86V35 215 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 ADGRG2Q8IZP9 1017 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 ZNF526Q8TF50 670 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-211ENST00000635893 ALG3Q92685 438 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
SCN1A-211ENST00000635893 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
SCN1A-211ENST00000635893 CNOT11Q9UKZ1 510 aaKnown RBP5.72□□□□□ -1.49
SCN1A-211ENST00000635893 A0A1B0GTL3 188 aa5.71□□□□□ -1.5
SCN1A-211ENST00000635893 CBFA2T2O43439 604 aa5.71□□□□□ -1.5
SCN1A-211ENST00000635893 FANCCQ00597 558 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms