RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GUF1Q8N442 669 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 GPR161Q8N6U8 529 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 C5P01031 1676 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 GAP43P17677 238 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ANXA13P27216 316 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 KRT9P35527 623 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 GABPB1Q06547 395 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 BRD3Q15059 726 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 UNC13DQ70J99 1090 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CWC15Q9P013 229 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PCDHA12Q9UN75 941 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 DNM3Q9UQ16 869 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 DAGLAQ9Y4D2 1042 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PAPPAQ13219 1627 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 NAPGQ99747 312 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RTFDC1Q9BY42 306 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ARFGAP3Q9NP61 516 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MTMR4Q9NYA4 1195 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L3A6NCW0 530 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L4A6NCW7 530 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CCT6AP40227 531 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 TXKP42681 527 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 BAG6P46379 1132 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 FXR2P51116 673 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ZBED6P86452 979 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ALCAMQ13740 583 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC93Q567U6 631 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L1Q7RTZ2 530 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 MCF2L2Q86YR7 1114 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PPP1R13BQ96KQ4 1090 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RUFY1Q96T51 708 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SERPINA10Q9UK55 444 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 RIMBP2O15034 1052 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ACTN4O43707 911 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 DLGAP5Q15398 846 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 DIXDC1Q155Q3 683 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 C7orf25Q9BPX7 421 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 WDR11Q9BZH6 1224 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PLCH1Q4KWH8 1693 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 TM4SF1P30408 202 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 FKBP3Q00688 224 aaKnown RBP5.08□□□□□ -1.6
SCN1A-210ENST00000635776 FBXO11Q86XK2 927 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 SPATA20Q8TB22 786 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PCDHA6Q9UN73 950 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PCDHA8Q9Y5H6 950 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
SCN1A-210ENST00000635776 PKN1Q16512 942 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 BZW2Q9Y6E2 419 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 POLD1P28340 1107 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 MAN2A1Q16706 1144 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 COBLL1Q53SF7 1204 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 FAM26FQ5R3K3 315 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 TBCKQ8TEA7 893 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 RABGGTAQ92696 567 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 PLIN4Q96Q06 1357 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 LRP5O75197 1615 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 TRIM37O94972 964 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 STX17P56962 302 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 LRMPQ12912 555 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 ABCB5Q2M3G0 1257 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 SLC9C1Q4G0N8 1177 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 FIGNQ5HY92 759 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 CPLX3Q8WVH0 158 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 UBR2Q8IWV8 1755 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 ANO9A1A5B4 782 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 TRIM58Q8NG06 486 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 DDX25Q9UHL0 483 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 COL4A3BPQ9Y5P4 624 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 SNAP23O00161 211 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 CTIFO43310 598 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 C10orf76Q5T2E6 689 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 SPAG5Q96R06 1193 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 PIGSQ96S52 555 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 H0YCG3 227 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 CCZ1BP86790 482 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 CCZ1P86791 482 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 RBM10P98175 930 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 OXER1Q8TDS5 423 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 IDI2Q9BXS1 227 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 GPCPD1Q9NPB8 672 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 PCDHA1Q9Y5I3 950 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 LRRC10BA6NIK2 292 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 MFAP3LO75121 409 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 ERLIN2O94905 339 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 BMP3P12645 472 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 NAP1L1P55209 391 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 ADSSL1Q8N142 457 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 CMTR1Q8N1G2 835 aaKnown RBP5.07□□□□□ -1.6
SCN1A-210ENST00000635776 EPSTI1Q96J88 318 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 STXBP3O00186 592 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 RXRBP28702 533 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 GUCY1A2P33402 732 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 TCP11X2Q5H9J9 407 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 SPECC1Q5M775 1068 aa5.07□□□□□ -1.6
SCN1A-210ENST00000635776 NYAP1Q6ZVC0 841 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms