RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 RTN1Q16799 776 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 USH1GQ495M9 461 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 IFFO2Q5TF58 517 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 FBXO11Q86XK2 927 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 ARMC5Q96C12 935 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
CLN6-211ENST00000635754 PFASO15067 1338 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 CYTH3O43739 400 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 HMGCRP04035 888 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 TAL1P17542 331 aaPredicted RBP17.97■□□□□ 0.47
CLN6-211ENST00000635754 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
CLN6-211ENST00000635754 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 TRIB2Q92519 343 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 PIGSQ96S52 555 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
CLN6-211ENST00000635754 ABCB11O95342 1321 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 COBLO75128 1261 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 PGK2P07205 417 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 METAP2P50579 478 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLN6-211ENST00000635754 UBXN2AP68543 259 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 TRAF1Q13077 416 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 SLC35G1Q2M3R5 365 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 NPLOC4Q8TAT6 608 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
CLN6-211ENST00000635754 ZNF333Q96JL9 665 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
CLN6-211ENST00000635754 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 INHAP05111 366 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 EVCP57679 992 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 CCL14Q16627 93 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
CLN6-211ENST00000635754 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
CLN6-211ENST00000635754 SEC63Q9UGP8 760 aaKnown RBP17.95■□□□□ 0.46
CLN6-211ENST00000635754 DIS3Q9Y2L1 958 aaKnown RBP17.95■□□□□ 0.46
CLN6-211ENST00000635754 NID2Q14112 1375 aa17.95■□□□□ 0.46
CLN6-211ENST00000635754 DNAJC25-GNG10A0A024R161 153 aa17.94■□□□□ 0.46
CLN6-211ENST00000635754 NFIBO00712 420 aa17.94■□□□□ 0.46
CLN6-211ENST00000635754 CMTR1Q8N1G2 835 aaKnown RBP17.94■□□□□ 0.46
CLN6-211ENST00000635754 PIBF1Q8WXW3 757 aa17.94■□□□□ 0.46
CLN6-211ENST00000635754 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
CLN6-211ENST00000635754 CENPFP49454 3210 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 CCDC85CA6NKD9 419 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
CLN6-211ENST00000635754 NEK4P51957 841 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 ZNF792Q3KQV3 632 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 MFSD14CQ5VZR4 134 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 CLEC4DQ8WXI8 215 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
CLN6-211ENST00000635754 CYP39A1Q9NYL5 469 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
CLN6-211ENST00000635754 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
CLN6-211ENST00000635754 MYCP01106 439 aaPredicted RBP17.92■□□□□ 0.46
CLN6-211ENST00000635754 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
CLN6-211ENST00000635754 CDC27P30260 824 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 ZNF274Q96GC6 653 aaPredicted RBP17.92■□□□□ 0.46
CLN6-211ENST00000635754 FLRT1Q9NZU1 646 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 LCTP09848 1927 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
CLN6-211ENST00000635754 PRKAR2AP13861 404 aaKnown RBP17.91■□□□□ 0.46
CLN6-211ENST00000635754 AK2P54819 239 aa17.91■□□□□ 0.46
CLN6-211ENST00000635754 RNF207Q6ZRF8 634 aa17.91■□□□□ 0.46
CLN6-211ENST00000635754 MCF2L2Q86YR7 1114 aa17.91■□□□□ 0.46
CLN6-211ENST00000635754 LARP6Q9BRS8 491 aaKnown RBP17.91■□□□□ 0.46
CLN6-211ENST00000635754 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
CLN6-211ENST00000635754 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
CLN6-211ENST00000635754 ADD1P35611 737 aaKnown RBP17.9■□□□□ 0.46
CLN6-211ENST00000635754 TRIM32Q13049 653 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 BAATQ14032 418 aaPredicted RBP17.9■□□□□ 0.46
CLN6-211ENST00000635754 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
CLN6-211ENST00000635754 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
CLN6-211ENST00000635754 FAM133AQ8N9E0 248 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 RGS22Q8NE09 1264 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 MAF1Q9H063 256 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 RPTORQ8N122 1335 aa17.9■□□□□ 0.46
CLN6-211ENST00000635754 CCL5P13501 91 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 CALML3P27482 149 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 CYP2C19P33261 490 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.46
CLN6-211ENST00000635754 CNTN2Q02246 1040 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.46
CLN6-211ENST00000635754 MTFR1Q15390 333 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 MAP3K21Q5TCX8 1036 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 SLC30A10Q6XR72 485 aa17.89■□□□□ 0.46
CLN6-211ENST00000635754 TINF2Q9BSI4 451 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms