RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 SMC1BQ8NDV3 1235 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 ACSBG1Q96GR2 724 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 KLHL25Q9H0H3 589 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 SAGE1Q9NXZ1 904 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 CASKIN1Q8WXD9 1431 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 B4E1Z4 1266 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 ESRRAP11474 423 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 GRIK1P39086 918 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 ALDH5A1P51649 535 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 PDE4BQ07343 736 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 MYBPC2Q14324 1141 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 PUM3Q15397 648 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 HDXQ7Z353 690 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 RAB44Q7Z6P3 723 aaPredicted RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 CNPY4Q8N129 248 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 POF1BQ8WVV4 589 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 BHMTQ93088 406 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 AHCYL2Q96HN2 611 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 MYD88Q99836 296 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 ZC3H12CQ9C0D7 883 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 FNIP2Q9P278 1114 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 TPX2Q9ULW0 747 aaKnown RBP9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 PTPN22Q9Y2R2 807 aa9.08□□□□□ -0.96
SMARCA2-243ENST00000635590 FRMPD1Q5SYB0 1578 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 ZBTB42B2RXF5 422 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 C9IYK1 514 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 DSG1Q02413 1049 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 ATP13A4Q4VNC1 1196 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 CHST15Q7LFX5 561 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 NGDNQ8NEJ9 315 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 OTUD5Q96G74 571 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 NUP88Q99567 741 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGB3Q9Y5G1 929 aa9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 RIMS1Q86UR5 1692 aaKnown RBP9.07□□□□□ -0.96
SMARCA2-243ENST00000635590 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 FHOD3Q2V2M9 1422 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 DCDC2BA2VCK2 349 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 KCNC4Q03721 635 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 SPEM2Q0P670 501 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 NTRK3Q16288 839 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 LONRF1Q17RB8 773 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 B3GNT9Q6UX72 402 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 NAP1L5Q96NT1 182 aaPredicted RBP9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 C1orf112Q9NSG2 853 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 SAMD15Q9P1V8 674 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
SMARCA2-243ENST00000635590 CRTAMO95727 393 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 IL33O95760 270 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 RHCEP18577 417 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 GPLD1P80108 840 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 RHDQ02161 417 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 AP3B2Q13367 1082 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 CCDC184Q52MB2 194 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 HYIQ5T013 277 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 ABHD17CQ6PCB6 329 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 SUGP1Q8IWZ8 645 aaKnown RBP9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 BVESQ8NE79 360 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 EMC7Q9NPA0 242 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 NMRK2Q9NPI5 230 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 DNM3Q9UQ16 869 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 ARHGEF40Q8TER5 1519 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 RBP3P10745 1247 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 SLC5A1P13866 664 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 CCDC93Q567U6 631 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 JAKMIP3Q5VZ66 844 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 PGM2L1Q6PCE3 622 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 ACSF2Q96CM8 615 aaPredicted RBP9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 MRGPRX3Q96LB0 322 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 SLC30A3Q99726 388 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 TRAF6Q9Y4K3 522 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 FANCAO15360 1455 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 FMN1Q68DA7 1419 aa9.05□□□□□ -0.96
SMARCA2-243ENST00000635590 A6NNZ2 444 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PCDHGA12O60330 932 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 SMNDC1O75940 238 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 KCNA6P17658 529 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 MCCP23508 829 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 HTRA3P83110 453 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 FAPQ12884 760 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 ELF2Q15723 593 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 TUBB8Q3ZCM7 444 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 EFHC2Q5JST6 749 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 MAMDC2Q7Z304 686 aaPredicted RBP9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 SLC35G2Q8TBE7 412 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 PGAP2Q9UHJ9 254 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 ADAM30Q9UKF2 790 aa9.04□□□□□ -0.96
SMARCA2-243ENST00000635590 HCN2Q9UL51 889 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms