RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
PSPC1-207ENST00000635251 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 KLRF2D3W0D1 207 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 ENC1O14682 589 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 OR52Z1P0C646 297 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 CYLC1P35663 651 aaPredicted RBP11.99□□□□□ -0.49
PSPC1-207ENST00000635251 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
PSPC1-207ENST00000635251 AMPD2Q01433 879 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 TBC1D8BQ0IIM8 1120 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
PSPC1-207ENST00000635251 SLC35G1Q2M3R5 365 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 TTI2Q6NXR4 508 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 KRT25Q7Z3Z0 450 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 FAM114A1Q8IWE2 563 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 P2RX5Q93086 422 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 LZTS2Q9BRK4 669 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
PSPC1-207ENST00000635251 MKRN1Q9UHC7 482 aaKnown RBP11.99□□□□□ -0.49
PSPC1-207ENST00000635251 GNPATO15228 680 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 KRT86O43790 486 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 TUBBP07437 444 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 SRGNP10124 158 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 CCNE1P24864 410 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 HNRNPH2P55795 449 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 BARGINQ6ZT62 677 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 NOA1Q8NC60 698 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 AK8Q96MA6 479 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 NUP58Q9BVL2 599 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 CPVLQ9H3G5 476 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 SUGCTQ9HAC7 445 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 ZNF287Q9HBT7 754 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 C6orf50Q9HD87 102 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 VPS18Q9P253 973 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 L1RE1Q9UN81 338 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 TFR2Q9UP52 801 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 CCDC88AQ3V6T2 1871 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 PALM3A6NDB9 673 aaPredicted RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 LDHCP07864 332 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 TECP42680 631 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 HERVK_113P62684 666 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 AMPD3Q01432 767 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 WDR59Q6PJI9 974 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 DUSP9Q99956 384 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 SEC63Q9UGP8 760 aaKnown RBP11.98□□□□□ -0.49
PSPC1-207ENST00000635251 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
PSPC1-207ENST00000635251 ROBO3Q96MS0 1386 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 PSMD14O00487 310 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 ATP1A1P05023 1023 aaKnown RBP11.97□□□□□ -0.49
PSPC1-207ENST00000635251 RASA1P20936 1047 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 GNA11P29992 359 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 LMAN1P49257 510 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 KLK7P49862 253 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 ZNF804AQ7Z570 1209 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 LRRC15Q8TF66 581 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 RRP36Q96EU6 259 aaKnown RBP11.97□□□□□ -0.49
PSPC1-207ENST00000635251 TRIM9Q9C026 710 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 ACBD3Q9H3P7 528 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 VAT1LQ9HCJ6 419 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 SAR1BQ9Y6B6 198 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
PSPC1-207ENST00000635251 FLT1P17948 1338 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 RGL2O15211 777 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 FCER1AP12319 257 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 STK4Q13043 487 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 CASP8Q14790 479 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
PSPC1-207ENST00000635251 HSP90B2PQ58FF3 399 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 FKBP15Q5T1M5 1219 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 NEK8Q86SG6 692 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 RETREG2Q8NC44 543 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 EXOC4Q96A65 974 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 CALML4Q96GE6 196 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 EYA3Q99504 573 aa11.97□□□□□ -0.49
PSPC1-207ENST00000635251 NHEJ1Q9H9Q4 299 aaPredicted RBP11.97□□□□□ -0.49
PSPC1-207ENST00000635251 SRGAP2O75044 1071 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 TM4SF1P30408 202 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 PPP1R2P41236 205 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 ZBED6P86452 979 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 GRIK5Q16478 980 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 MEA1Q16626 185 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.49
PSPC1-207ENST00000635251 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms