RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 ZMYND12Q9H0C1 365 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 VPS54Q9P1Q0 977 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 CCPG1Q9ULG6 757 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
MECP2-220ENST00000631210 RBBP6Q7Z6E9 1792 aaKnown RBP9.62□□□□□ -0.87
MECP2-220ENST00000631210 ZNFX1Q9P2E3 1918 aaKnown RBP9.62□□□□□ -0.87
MECP2-220ENST00000631210 ASTN1O14525 1302 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 DNAJC25-GNG10A0A024R161 153 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ALAS1P13196 640 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ERCC3P19447 782 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 HMGN5P82970 282 aaKnown RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 HEATR3Q7Z4Q2 680 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 TRIM22Q8IYM9 498 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 SHCBP1Q8NEM2 672 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 GPRC5AQ8NFJ5 357 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 TNFRSF25Q93038 417 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 TRERF1Q96PN7 1200 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 PURBQ96QR8 312 aaKnown RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 ARHGAP39Q9C0H5 1083 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 SH3GLB2Q9NR46 395 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 RNF146Q9NTX7 359 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 SAGE1Q9NXZ1 904 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 RBM27Q9P2N5 1060 aaKnown RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 KCNJ14Q9UNX9 436 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.61□□□□□ -0.87
MECP2-220ENST00000631210 HTTP42858 3142 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ZNF236Q9UL36 1845 aa9.61□□□□□ -0.87
MECP2-220ENST00000631210 ABCB11O95342 1321 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 hCG_1984214I3L0E3 225 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 IGHA2P01877 340 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 ANP32AP39687 249 aaKnown RBP9.6□□□□□ -0.87
MECP2-220ENST00000631210 HSD17B4P51659 736 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 FOSBP53539 338 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 PKP1Q13835 747 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 BECN1Q14457 450 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 PLS1Q14651 629 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 TKFCQ3LXA3 575 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 EARS2Q5JPH6 523 aaKnown RBP9.6□□□□□ -0.87
MECP2-220ENST00000631210 KRT40Q6A162 431 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 ZNF713Q8N859 430 aaPredicted RBP9.6□□□□□ -0.87
MECP2-220ENST00000631210 DAGLBQ8NCG7 672 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 RGS22Q8NE09 1264 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 USP6NLQ92738 828 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
MECP2-220ENST00000631210 HOMER2Q9NSB8 354 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 SEC63Q9UGP8 760 aaKnown RBP9.6□□□□□ -0.87
MECP2-220ENST00000631210 TSKSQ9UJT2 592 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 GJD2Q9UKL4 321 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 ZDHHC9Q9Y397 364 aa9.6□□□□□ -0.87
MECP2-220ENST00000631210 SMCO2A6NFE2 343 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 KIF28PB7ZC32 967 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 GPR25O00155 361 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 SLC25A27O95847 323 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MMP1P03956 469 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 SYT1P21579 422 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 NAPAP54920 295 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 LACTBP83111 547 aaPredicted RBP9.59□□□□□ -0.87
MECP2-220ENST00000631210 GUCY1B3Q02153 619 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MAP2K1Q02750 393 aaPredicted RBP9.59□□□□□ -0.87
MECP2-220ENST00000631210 UBE2SQ16763 222 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MORN1Q5T089 497 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 USP17L6PQ6QN14 398 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 SLC30A10Q6XR72 485 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 GPR142Q7Z601 462 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 NCAPG2Q86XI2 1143 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 SYTL5Q8TDW5 730 aaPredicted RBP9.59□□□□□ -0.87
MECP2-220ENST00000631210 CRYGNQ8WXF5 182 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MROH8Q9H579 483 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 RIC8AQ9NPQ8 531 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 TMEM260Q9NX78 707 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 CYP39A1Q9NYL5 469 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MTMR6Q9Y217 621 aa9.59□□□□□ -0.87
MECP2-220ENST00000631210 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
MECP2-220ENST00000631210 SOWAHBA6NEL2 793 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 COBLO75128 1261 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 PTPREP23469 700 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 HOXA13P31271 388 aaPredicted RBP9.58□□□□□ -0.88
MECP2-220ENST00000631210 RPS6P62753 249 aaKnown RBP9.58□□□□□ -0.88
MECP2-220ENST00000631210 AKAP17AQ02040 695 aaKnown RBP9.58□□□□□ -0.88
MECP2-220ENST00000631210 CNTN2Q02246 1040 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 NR5A1Q13285 461 aa9.58□□□□□ -0.88
MECP2-220ENST00000631210 BAATQ14032 418 aaPredicted RBP9.58□□□□□ -0.88
MECP2-220ENST00000631210 GRB14Q14449 540 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms