RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TEX11Q8IYF3 940 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 ADSSL1Q8N142 457 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 GOLGA1Q92805 767 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 EYA3Q99504 573 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 ZMYND12Q9H0C1 365 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 THAP9Q9H5L6 903 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 C6orf50Q9HD87 102 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 ZNF446Q9NWS9 450 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TAB2Q9NYJ8 693 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 SAP30BPQ9UHR5 308 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 STX8Q9UNK0 236 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 GPR75-ASB3A0A0A6YYF3 556 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 LGALS16A8MUM7 142 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 KLRF2D3W0D1 207 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 ATP8B1O43520 1251 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 CYTH3O43739 400 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 UFL1O94874 794 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 RHOBTB3O94955 611 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 OR52Z1P0C646 297 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 IL1R1P14778 569 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 GNA11P29992 359 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 PPP1R2P41236 205 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 CDK8P49336 464 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 FXR1P51114 621 aaKnown RBP eCLIP9.07□□□□□ -0.96
GPC3-204ENST00000631057 NAPAP54920 295 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TUBB4BP68371 445 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 FAM193AP78312 1265 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 NONOQ15233 471 aaKnown RBP eCLIP9.07□□□□□ -0.96
GPC3-204ENST00000631057 SLC35G1Q2M3R5 365 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 NAALADL2Q58DX5 795 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 JAKMIP3Q5VZ66 844 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 RSRC2Q7L4I2 434 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 CREBRFQ8IUR6 639 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 SLC44A5Q8NCS7 719 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TBC1D22AQ8WUA7 517 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 RABGGTAQ92696 567 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 NUP88Q99567 741 aaPredicted RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 VPS16Q9H269 839 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TMEM60Q9H2L4 133 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 LZTFL1Q9NQ48 299 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 MYO1AQ9UBC5 1043 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 MAGEC2Q9UBF1 373 aaPredicted RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 SEC63Q9UGP8 760 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 GGA1Q9UJY5 639 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 GDAQ9Y2T3 454 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 A0A1W2PQC6 194 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 ESYT2A0FGR8 921 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 BICDL2A1A5D9 508 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 hCG_1984214I3L0E3 225 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 KLRC4O43908 158 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 PPP1R37O75864 691 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 ZRANB2O95218 330 aaKnown RBP eCLIP9.06□□□□□ -0.96
GPC3-204ENST00000631057 KIF20AO95235 890 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 PNMA6AP0CW24 399 aaPredicted RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 ST5P78524 1137 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 GPSM2P81274 684 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 UBXN1Q04323 297 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 GRIK5Q16478 980 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 TEX35Q5T0J7 233 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 SOGA3Q5TF21 947 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 KRT27Q7Z3Y8 459 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 CABP7Q86V35 215 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 ZNF713Q8N859 430 aaPredicted RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 GIMAP8Q8ND71 665 aaPredicted RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 DHTKD1Q96HY7 919 aaPredicted RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
GPC3-204ENST00000631057 CD209Q9NNX6 404 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 PRDM4Q9UKN5 801 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 FHOD1Q9Y613 1164 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 MYH7BA7E2Y1 1941 aa9.06□□□□□ -0.96
GPC3-204ENST00000631057 LTBP1Q14766 1721 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 QSER1Q2KHR3 1735 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 PLIN4Q96Q06 1357 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 GAKO14976 1311 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 FLT1P17948 1338 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 CTAGE9A4FU28 777 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 PP2D1A8MPX8 630 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 COBLO75128 1261 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 CDC25AP30304 524 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 KRT9P35527 623 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 AMPD3Q01432 767 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
GPC3-204ENST00000631057 CRY2Q49AN0 593 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 PRR5LQ6MZQ0 368 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 SRGAP1Q7Z6B7 1085 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 NEK8Q86SG6 692 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
GPC3-204ENST00000631057 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms