RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	CTU1	Q7Z7A3	348 aa	Known RBP	30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	GTF3C6	Q969F1	213 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	MMP19	Q99542	508 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	SRRD	Q9UH36	339 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	PCDHA1	Q9Y5I3	950 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	ZSWIM8	A7E2V4	1837 aa		30.1	■■■□□ 2.41
UBE3A-222	ENST00000630907	SLC15A5	A6NIM6	579 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	MGAM	O43451	1857 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	KCTD2	Q14681	263 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	MUM1L1	Q5H9M0	696 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	ABRA	Q8N0Z2	381 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	PHKB	Q93100	1093 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	SH2B1	Q9NRF2	756 aa	Predicted RBP	30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	GJD2	Q9UKL4	321 aa		30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	MRPL11	Q9Y3B7	192 aa	Known RBP	30.09	■■■□□ 2.41
UBE3A-222	ENST00000630907	PRPF3	O43395	683 aa	Known RBP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	CD2BP2	O95400	341 aa	Known RBP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	PRMT2	P55345	433 aa		30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	AKAP17A	Q02040	695 aa	Known RBP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	GRB14	Q14449	540 aa		30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	MORN1	Q5T089	497 aa		30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	SOCS4	Q8WXH5	440 aa		30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	NUDT12	Q9BQG2	462 aa		30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	RNF26	Q9BY78	433 aa	Predicted RBP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	RBM27	Q9P2N5	1060 aa	Known RBP	30.08	■■■□□ 2.41
UBE3A-222	ENST00000630907	CDKL5	O76039	1030 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	PRKCZ	Q05513	592 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	ANKRD35	Q8N283	1001 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	CLEC4D	Q8WXI8	215 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	SLC26A6	Q9BXS9	759 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	GABRQ	Q9UN88	632 aa		30.07	■■■□□ 2.4
UBE3A-222	ENST00000630907	PPFIA3	O75145	1194 aa		30.06	■■■□□ 2.4
UBE3A-222	ENST00000630907	ADORA2A	P29274	412 aa		30.06	■■■□□ 2.4
UBE3A-222	ENST00000630907	FLT3LG	P49771	235 aa		30.06	■■■□□ 2.4
UBE3A-222	ENST00000630907	SSRP1	Q08945	709 aa	Known RBP	30.06	■■■□□ 2.4
UBE3A-222	ENST00000630907	TRIM22	Q8IYM9	498 aa		30.06	■■■□□ 2.4
UBE3A-222	ENST00000630907	NFIB	O00712	420 aa		30.05	■■■□□ 2.4
UBE3A-222	ENST00000630907	MAP2K5	Q13163	448 aa		30.05	■■■□□ 2.4
UBE3A-222	ENST00000630907	USP6NL	Q92738	828 aa		30.05	■■■□□ 2.4
UBE3A-222	ENST00000630907	DDX11	Q96FC9	970 aa		30.05	■■■□□ 2.4
UBE3A-222	ENST00000630907	RGS2	P41220	211 aa		30.04	■■■□□ 2.4
UBE3A-222	ENST00000630907	NSMF	Q6X4W1	530 aa		30.04	■■■□□ 2.4
UBE3A-222	ENST00000630907	HEATR3	Q7Z4Q2	680 aa		30.04	■■■□□ 2.4
UBE3A-222	ENST00000630907	A1CF	Q9NQ94	594 aa	Known RBP	30.04	■■■□□ 2.4
UBE3A-222	ENST00000630907	MYH6	P13533	1939 aa		30.04	■■■□□ 2.4
UBE3A-222	ENST00000630907	CTDNEP1	O95476	244 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	ST3GAL1	Q11201	340 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	PFKFB3	Q16875	520 aa	Predicted RBP	30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	DPP9	Q86TI2	863 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	MCF2L2	Q86YR7	1114 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	CCDC83	Q8IWF9	413 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	PTPN22	Q9Y2R2	807 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	SMCHD1	A6NHR9	2005 aa		30.03	■■■□□ 2.4
UBE3A-222	ENST00000630907	PFAS	O15067	1338 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	DOCK3	Q8IZD9	2030 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	PGK2	P07205	417 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	SCG2	P13521	617 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	CYP2B6	P20813	491 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	WWC2	Q6AWC2	1192 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	RGS22	Q8NE09	1264 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	RAET1E	Q8TD07	263 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	TMX3	Q96JJ7	454 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	MAF1	Q9H063	256 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	SLC5A4	Q9NY91	659 aa		30.02	■■■□□ 2.4
UBE3A-222	ENST00000630907	PLXNB2	O15031	1838 aa		30.01	■■■□□ 2.4
UBE3A-222	ENST00000630907	hCG_1984214	I3L0E3	225 aa		30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	COBL	O75128	1261 aa		30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	IRF5	Q13568	498 aa		30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	PKN1	Q16512	942 aa		30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	PKN2	Q16513	984 aa	Known RBP	30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	ZNF713	Q8N859	430 aa	Predicted RBP	30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	CYP39A1	Q9NYL5	469 aa		30.01	■■■□□ 2.39
UBE3A-222	ENST00000630907	PTPDC1	A2A3K4	754 aa		30	■■■□□ 2.39
UBE3A-222	ENST00000630907	DEXI	O95424	95 aa		30	■■■□□ 2.39
UBE3A-222	ENST00000630907	HOXC6	P09630	235 aa		30	■■■□□ 2.39
UBE3A-222	ENST00000630907	BAAT	Q14032	418 aa	Predicted RBP	30	■■■□□ 2.39
UBE3A-222	ENST00000630907	RNF207	Q6ZRF8	634 aa		30	■■■□□ 2.39
UBE3A-222	ENST00000630907	NSUN7	Q8NE18	718 aa	Known RBP	30	■■■□□ 2.39
UBE3A-222	ENST00000630907	STK36	Q9NRP7	1315 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	DNAJC25-GNG10	A0A024R161	153 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	POTEB2	H3BUK9	544 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	OPLAH	O14841	1288 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	XRCC5	P13010	732 aa	Known RBP	29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	TBC1D5	Q92609	795 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	APBA2	Q99767	749 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	LLPH	Q9BRT6	129 aa	Known RBP	29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	BARHL2	Q9NY43	387 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	PTCH2	Q9Y6C5	1203 aa		29.99	■■■□□ 2.39
UBE3A-222	ENST00000630907	STXBP3	O00186	592 aa		29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	NAPA	P54920	295 aa		29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	ZNF792	Q3KQV3	632 aa		29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	PPP1R18	Q6NYC8	613 aa		29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	FBXO46	Q6PJ61	603 aa	Predicted RBP	29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	ZNF236	Q9UL36	1845 aa		29.98	■■■□□ 2.39
UBE3A-222	ENST00000630907	DTNB	O60941	627 aa		29.97	■■■□□ 2.39
UBE3A-222	ENST00000630907	CFB	P00751	764 aa		29.97	■■■□□ 2.39
UBE3A-222	ENST00000630907	CALML3	P27482	149 aa		29.97	■■■□□ 2.39
UBE3A-222	ENST00000630907	RPS6	P62753	249 aa	Known RBP	29.97	■■■□□ 2.39

Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms