RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 CALM1P0DP23 149 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 CALM2P0DP24 149 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 CALM3P0DP25 149 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 KIF5BP33176 963 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 CNTN2Q02246 1040 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 MFSD14CQ5VZR4 134 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 Q6ZUG5 572 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
SOX2-OT-248ENST00000628496 PFASO15067 1338 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 KLF18A0A0U1RQI7 1052 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 ZBTB5O15062 677 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 GJB1P08034 283 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 EN2P19622 333 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 CCND3P30281 292 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 NSMFQ6X4W1 530 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 HOMER1Q86YM7 354 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 FBXL16Q8N461 479 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 FANCBQ8NB91 859 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 TRPV1Q8NER1 839 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 BRF1Q92994 677 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 SHISA4Q96DD7 197 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 PIGSQ96S52 555 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 SPZ1Q9BXG8 430 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 AGXT2Q9BYV1 514 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-248ENST00000628496 ASTN1O14525 1302 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 ABCB11O95342 1321 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 CYBAP13498 195 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 FGD1P98174 961 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 APOBRQ0VD83 1088 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 BAATQ14032 418 aaPredicted RBP15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 SLC30A10Q6XR72 485 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 FBXO11Q86XK2 927 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 DEFB118Q96PH6 123 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
SOX2-OT-248ENST00000628496 BRCA2P51587 3418 aa15.77■□□□□ 0.11
SOX2-OT-248ENST00000628496 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 ZBTB43O43298 467 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 EIF5BO60841 1220 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 GJA8P48165 433 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 RGS19P49795 217 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 GNAQP50148 359 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 ANAPC15P60006 121 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 TOB2Q14106 344 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 TMTC3Q6ZXV5 915 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 ZNF467Q7Z7K2 595 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 IL17RAQ96F46 866 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 PURBQ96QR8 312 aaKnown RBP15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 LZTS2Q9BRK4 669 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 CYP46A1Q9Y6A2 500 aa15.76■□□□□ 0.11
SOX2-OT-248ENST00000628496 SYNGAP1Q96PV0 1343 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 PNMA6FA0A0J9YX94 578 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 GOLGA8AA7E2F4 631 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 GOLGA8BA8MQT2 603 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 OPLAHO14841 1288 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 SGPL1O95470 568 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 RCAN1P53805 252 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
SOX2-OT-248ENST00000628496 SNAI1O95863 264 aaPredicted RBP15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 CDC27P30260 824 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RPS6P62753 249 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 FUT2Q10981 343 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RTN1Q16799 776 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 LHX8Q68G74 356 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RNF207Q6ZRF8 634 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RGS22Q8NE09 1264 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 TBC1D5Q92609 795 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 CRISPLD2Q9H0B8 497 aa15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 RBM28Q9NW13 759 aaKnown RBP15.74■□□□□ 0.11
SOX2-OT-248ENST00000628496 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms