RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 SPZ1Q9BXG8 430 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 LRRC2Q9BYS8 371 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 ACAD9Q9H845 621 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 RAVER2Q9HCJ3 691 aaKnown RBP9.34□□□□□ -0.91
CHD2-213ENST00000628118 CCPG1Q9ULG6 757 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 NID2Q14112 1375 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 PFASO15067 1338 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 ABCB11O95342 1321 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 LOC102724159A0A0B4J2E5 919 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 KLF18A0A0U1RQI7 1052 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 ZBTB5O15062 677 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 DHX16O60231 1041 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 GRK4P32298 578 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 UBXN2AP68543 259 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 CAP1Q01518 475 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 PWP2Q15269 919 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 CDC37Q16543 378 aaPredicted RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 RTN1Q16799 776 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 SLC9C1Q4G0N8 1177 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 OLFML2BQ68BL8 750 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 CCDC174Q6PII3 467 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 DPP9Q86TI2 863 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 MICU3Q86XE3 530 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 TEX2Q8IWB9 1127 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 MSL3Q8N5Y2 521 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 RGS22Q8NE09 1264 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 BRF1Q92994 677 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 ARMC5Q96C12 935 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 CHMP4CQ96CF2 233 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 ZNF274Q96GC6 653 aaPredicted RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 TMEM106CQ9BVX2 250 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 AMNQ9BXJ7 453 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 C22orf23Q9BZE7 217 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 RNF146Q9NTX7 359 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 PDRG1Q9NUG6 133 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 MAP3K20Q9NYL2 800 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 RBM27Q9P2N5 1060 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 GABRQQ9UN88 632 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 MRPL11Q9Y3B7 192 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 PTCH2Q9Y6C5 1203 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 PLXNB2O15031 1838 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 MYH6P13533 1939 aa9.33□□□□□ -0.92
CHD2-213ENST00000628118 ZNFX1Q9P2E3 1918 aaKnown RBP9.33□□□□□ -0.92
CHD2-213ENST00000628118 PNMA6FA0A0J9YX94 578 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 GOLGA8AA7E2F4 631 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 GOLGA8BA8MQT2 603 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 ADCY3O60266 1144 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 PEX10O60683 326 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 SEC24BO95487 1268 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 HMGCRP04035 888 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 ALAS1P13196 640 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 ADORA2AP29274 412 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHD2-213ENST00000628118 QRICH1Q2TAL8 776 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 MCF2L2Q86YR7 1114 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 RRP36Q96EU6 259 aaKnown RBP9.32□□□□□ -0.92
CHD2-213ENST00000628118 DDX11Q96FC9 970 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 TCEANC2Q96MN5 208 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
CHD2-213ENST00000628118 SEC63Q9UGP8 760 aaKnown RBP9.32□□□□□ -0.92
CHD2-213ENST00000628118 RIPK3Q9Y572 518 aa9.32□□□□□ -0.92
CHD2-213ENST00000628118 ZSWIM8A7E2V4 1837 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 DNAJC25-GNG10A0A024R161 153 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 hCG_1984214I3L0E3 225 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 CYP2B6P20813 491 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 COL9A3Q14050 684 aaPredicted RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 MFSD14CQ5VZR4 134 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 CPLX2Q6PUV4 134 aaKnown RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 ANKRD35Q8N283 1001 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 ZNF713Q8N859 430 aaPredicted RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 MYL10Q9BUA6 226 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 UPF3BQ9BZI7 483 aaKnown RBP9.31□□□□□ -0.92
CHD2-213ENST00000628118 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 NRBP1Q9UHY1 535 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 BRPF3Q9ULD4 1205 aa9.31□□□□□ -0.92
CHD2-213ENST00000628118 BAZ2BQ9UIF8 2168 aaKnown RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 B4DLN1 442 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 CYTH3O43739 400 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 CPA1P15085 419 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 PDIA3P30101 505 aaKnown RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 SLC4A3P48751 1232 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 GHRHRQ02643 423 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 APOBRQ0VD83 1088 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 TOB2Q14106 344 aaPredicted RBP9.3□□□□□ -0.92
CHD2-213ENST00000628118 RABEP1Q15276 862 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 ZNF792Q3KQV3 632 aa9.3□□□□□ -0.92
CHD2-213ENST00000628118 SRBD1Q8N5C6 995 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms