RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
SMN2-214ENST00000626847 NUDT16Q96DE0 195 aaKnown RBP9.41□□□□□ -0.9
SMN2-214ENST00000626847 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
SMN2-214ENST00000626847 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
SMN2-214ENST00000626847 NAP1L3Q99457 506 aaPredicted RBP9.41□□□□□ -0.9
SMN2-214ENST00000626847 CDC5LQ99459 802 aaKnown RBP9.41□□□□□ -0.9
SMN2-214ENST00000626847 PAGR1Q9BTK6 254 aa9.41□□□□□ -0.9
SMN2-214ENST00000626847 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
SMN2-214ENST00000626847 FAM25EA8MYX2 175 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 KDM1AO60341 852 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 GDF9O60383 454 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ZBED4O75132 1171 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 BBOX1O75936 387 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 UPP2O95045 317 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 FESP07332 822 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 PCSK2P16519 638 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 GPTP24298 496 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ZAP70P43403 619 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 USP5P45974 858 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 PLA2G4AP47712 749 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 FAAH2Q6GMR7 532 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ARHGAP22Q7Z5H3 698 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 CCDC50Q8IVM0 306 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 CCDC112Q8NEF3 446 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ZFAND2BQ8WV99 257 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
SMN2-214ENST00000626847 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
SMN2-214ENST00000626847 COMMD8Q9NX08 183 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ZMAT5Q9UDW3 170 aaKnown RBP9.4□□□□□ -0.9
SMN2-214ENST00000626847 POLIQ9UNA4 740 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ABCC6O95255 1503 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 COL18A1P39060 1754 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 ACEP12821 1306 aa9.4□□□□□ -0.9
SMN2-214ENST00000626847 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 SMPD1P17405 629 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 HNRNPH1P31943 449 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 GPC1P35052 558 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 GCLCP48506 637 aaPredicted RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 USP11P51784 963 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMN2-214ENST00000626847 PABPC4Q13310 644 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMN2-214ENST00000626847 SLMAPQ14BN4 828 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 C1orf53Q5VUE5 145 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 CCDC174Q6PII3 467 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 ETFBKMTQ8IXQ9 262 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 TRIML1Q8N9V2 468 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 TEKT4Q8WW24 435 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 EDEM1Q92611 657 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 TBC1D32Q96NH3 1257 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 SCINQ9Y6U3 715 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 PTPRCP08575 1304 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 KCPQ6ZWJ8 1503 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 PPFIA3O75145 1194 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ERLIN2O94905 339 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 DDIT3P35638 169 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ZBED6P86452 979 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ATP2B2Q01814 1243 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMN2-214ENST00000626847 EHHADHQ08426 723 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 FXNQ16595 210 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 FAM26DQ5JW98 314 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 XP32Q5T750 250 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 LRSAM1Q6UWE0 723 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 MAB21L3Q8N8X9 362 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 INSM2Q96T92 566 aaPredicted RBP9.39□□□□□ -0.91
SMN2-214ENST00000626847 TOR4AQ9NXH8 423 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 PCSK1NQ9UHG2 260 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 N6AMT1Q9Y5N5 214 aa9.39□□□□□ -0.91
SMN2-214ENST00000626847 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 PPIP5K1Q6PFW1 1433 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 GOLGA8AA7E2F4 631 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 TMEM232C9JQI7 657 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 TUBB4AP04350 444 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 LDHBP07195 334 aaKnown RBP9.38□□□□□ -0.91
SMN2-214ENST00000626847 IDO1P14902 403 aa9.38□□□□□ -0.91
SMN2-214ENST00000626847 VAMP1P23763 118 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms