RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 C12orf60Q5U649 245 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 CCAR1Q8IX12 1150 aaKnown RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 ANKRD13CQ8N6S4 541 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 PI4K2BQ8TCG2 481 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 OTUD7AQ8TE49 926 aaPredicted RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 WHAMMQ8TF30 809 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 COA7Q96BR5 231 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 EVI5LQ96CN4 794 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 CCDC17Q96LX7 622 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 STRBPQ96SI9 672 aaKnown RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 ARHGAP39Q9C0H5 1083 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 ZNF287Q9HBT7 754 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 BIN2Q9UBW5 565 aaPredicted RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 MYO5AQ9Y4I1 1855 aaKnown RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 MYPNQ86TC9 1320 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 ADGRA2Q96PE1 1338 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 MINDY4BA8MYZ0 360 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L15C9J2P7 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 PATL2C9JE40 543 aaKnown RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L13C9JLJ4 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L11C9JVI0 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L18D6R9N7 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L22D6RA61 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L17D6RBQ6 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L19D6RCP7 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L20D6RJB6 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 GPAA1O43292 621 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 CHGBP05060 677 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 SLC3A2P08195 630 aaKnown RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 HOXA7P31268 230 aaPredicted RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 CDK8P49336 464 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 PDE1AP54750 535 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 GABPAQ06546 454 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 USP17L24Q0WX57 530 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 SEPT2Q15019 361 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 SHROOM1Q2M3G4 852 aaPredicted RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 CTR9Q6PD62 1173 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 TMEM179Q6ZVK1 233 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 CHD1LQ86WJ1 897 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 GTF3C2Q8WUA4 911 aaPredicted RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 OSBP2Q969R2 916 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 DYNLL2Q96FJ2 89 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 P2RX7Q99572 595 aaKnown RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 ASCC2Q9H1I8 757 aaPredicted RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 SH2D4AQ9H788 454 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 MKNK2Q9HBH9 465 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 CWC22Q9HCG8 908 aaKnown RBP7.63□□□□□ -1.19
TCF4-249ENST00000625716 STAP2Q9UGK3 403 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 SRRDQ9UH36 339 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 PTCH2Q9Y6C5 1203 aa7.63□□□□□ -1.19
TCF4-249ENST00000625716 FOCADQ5VW36 1801 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 CYP2D7A0A087X1C5 515 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 GSG1L2A8MUP6 293 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 M0R2C6 588 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 IGHDP01880 384 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 SCTRP47872 440 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 RGS19P49795 217 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
TCF4-249ENST00000625716 HERVK_113P62684 666 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 UBXN2AP68543 259 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 IRX6P78412 446 aaPredicted RBP7.62□□□□□ -1.19
TCF4-249ENST00000625716 ATP2B2Q01814 1243 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 NUCB1Q02818 461 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 FAM110CQ1W6H9 321 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 SBK1Q52WX2 424 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
TCF4-249ENST00000625716 C16orf86Q6ZW13 317 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 SV2AQ7L0J3 742 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 SMC5Q8IY18 1101 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 ZNF444Q8N0Y2 327 aaPredicted RBP7.62□□□□□ -1.19
TCF4-249ENST00000625716 STK11IPQ8N1F8 1099 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 SLC44A5Q8NCS7 719 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 GPRC5AQ8NFJ5 357 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 RILPL2Q969X0 211 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 KIAA1683Q9H0B3 1180 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 MYH1P12882 1939 aa7.62□□□□□ -1.19
TCF4-249ENST00000625716 CDC14CA4D256 554 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 RAD21O60216 631 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 MYCP01106 439 aaPredicted RBP7.61□□□□□ -1.19
TCF4-249ENST00000625716 AKR1B1P15121 316 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 GRK4P32298 578 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 CCNA1P78396 465 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 CAP1Q01518 475 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 ICA1Q05084 483 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 PRKCZQ05513 592 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 PDE4BQ07343 736 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 KCNMA1Q12791 1236 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 PRICKLE2Q7Z3G6 844 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 TICAM2Q86XR7 235 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 IFNL3Q8IZI9 196 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 BANK1Q8NDB2 785 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 ACER1Q8TDN7 264 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 SH3TC2Q8TF17 1288 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms