RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 FBXL7Q9UJT9 491 aa4.01□□□□□ -1.77
SCARNA4-202ENST00000625402 TCFL5Q9UL49 500 aa4.01□□□□□ -1.77
SCARNA4-202ENST00000625402 PLAAQ9Y263 795 aa4.01□□□□□ -1.77
SCARNA4-202ENST00000625402 TRAF6Q9Y4K3 522 aa4.01□□□□□ -1.77
SCARNA4-202ENST00000625402 DNAJC25-GNG10A0A024R161 153 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 A0A087X0B3 334 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4□□□□□ -1.77
SCARNA4-202ENST00000625402 C2orf71A6NGG8 1288 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 FGF10O15520 208 aaPredicted RBP4□□□□□ -1.77
SCARNA4-202ENST00000625402 KCNQ2O43526 872 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 RFPL3O75679 317 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 RASGRP1O95267 797 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 MED26O95402 600 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 GSTM1P09488 218 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 LCP1P13796 627 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 PLS3P13797 630 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 POU3F3P20264 500 aaPredicted RBP4□□□□□ -1.77
SCARNA4-202ENST00000625402 HOXC12P31275 282 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 AMPD3Q01432 767 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 POU4F1Q01851 419 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 ZNF460Q14592 562 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 RCSD1Q6JBY9 416 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 ZNF574Q6ZN55 896 aaPredicted RBP4□□□□□ -1.77
SCARNA4-202ENST00000625402 PPIL6Q8IXY8 311 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 TRIT1Q9H3H1 467 aaKnown RBP4□□□□□ -1.77
SCARNA4-202ENST00000625402 EBF1Q9UH73 591 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 NDOR1Q9UHB4 597 aa4□□□□□ -1.77
SCARNA4-202ENST00000625402 TMEM265A0A087WTH1 108 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 CCDC163A0A0D9SF12 145 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 GSG1L2A8MUP6 293 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 MSCO60682 206 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 VIL1P09327 827 aaKnown RBP3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 LTKP29376 864 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 EGR3Q06889 387 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 BNIP3Q12983 259 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 TESK1Q15569 626 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 PTPROQ16827 1216 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 INF2Q27J81 1249 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 FNDC3BQ53EP0 1204 aaKnown RBP3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 STYK1Q6J9G0 422 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 CREG2Q8IUH2 290 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 TMEM52Q8NDY8 209 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 HRASLS5Q96KN8 279 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 G6PC3Q9BUM1 346 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 TARS2Q9BW92 718 aaKnown RBP3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 SPC25Q9HBM1 224 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 ZNF281Q9Y2X9 895 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 PRKAB1Q9Y478 270 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 COL4A3BPQ9Y5P4 624 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 NPFFR2Q9Y5X5 522 aa3.99□□□□□ -1.77
SCARNA4-202ENST00000625402 PDE8AO60658 829 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 DNAJC6O75061 913 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 CPP00450 1065 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 MYCLP1P12525 358 aaPredicted RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 STAT3P40763 770 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 PCBP3P57721 371 aaKnown RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 GABREP78334 506 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 AOC3Q16853 763 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 ACBD5Q5T8D3 534 aaPredicted RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 RNF187Q5TA31 235 aaPredicted RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 EEF1DP3Q658K8 133 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 ABHD17CQ6PCB6 329 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 RNF111Q6ZNA4 994 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 TMPRSS7Q7RTY8 843 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 SPRED2Q7Z698 418 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 RNF180Q86T96 592 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 RPUSD2Q8IZ73 545 aaKnown RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 PTPRN2Q92932 1015 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 CCDC140Q96MF4 163 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 PTCHD1Q96NR3 888 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 PHF20Q9BVI0 1012 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 CDADC1Q9BWV3 514 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 SLKQ9H2G2 1235 aaPredicted RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 SEMA6BQ9H3T3 888 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 PCDH12Q9NPG4 1184 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 TNPO3Q9Y5L0 923 aaKnown RBP3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 SNX11Q9Y5W9 270 aa3.98□□□□□ -1.77
SCARNA4-202ENST00000625402 TCRBV16S1A1N1A0A5B0 115 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 MEFVO15553 781 aaPredicted RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 CLSTN1O94985 981 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 CRTAMO95727 393 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 EFEMP2O95967 443 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 NCLP19338 710 aaKnown RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 SEPHS1P49903 392 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 PRKCQQ04759 706 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 SEPT7Q16181 437 aaKnown RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 MAMDC2Q7Z304 686 aaPredicted RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 WAPLQ7Z5K2 1190 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 LRRTM3Q86VH5 581 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 NLRP10Q86W26 655 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 CPNE8Q86YQ8 564 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 KSR1Q8IVT5 923 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 UBR7Q8N806 425 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 BCL7CQ8WUZ0 217 aaPredicted RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 IPO9Q96P70 1041 aaKnown RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 CARS2Q9HA77 564 aaKnown RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 PPARGC1AQ9UBK2 798 aaKnown RBP3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 FBLN5Q9UBX5 448 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 RNF112Q9ULX5 631 aa3.97□□□□□ -1.77
SCARNA4-202ENST00000625402 PCDHA9Q9Y5H5 950 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms