RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
LINC00963-220ENST00000625171 GPT2Q8TD30 523 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 NUP88Q99567 741 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-220ENST00000625171 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 FAM237AA0A1B0GTK4 181 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 TRIM75PA6NK02 468 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 LAD1O00515 517 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 FOSP01100 380 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 ICAM1P05362 532 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 ADCY7P51828 1080 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 MTMR2Q13614 643 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 NBR1Q14596 966 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 ARL6IP4Q66PJ3 421 aaKnown RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 REXO1Q8N1G1 1221 aaKnown RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 PROCA1Q8NCQ7 364 aaPredicted RBP13.45□□□□□ -0.26
LINC00963-220ENST00000625171 CUL5Q93034 780 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 COA7Q96BR5 231 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 PSTPIP2Q9H939 334 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 SLC38A10Q9HBR0 1119 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 PPP1R9AQ9ULJ8 1098 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
LINC00963-220ENST00000625171 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 GADD45BO75293 160 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 PTPREP23469 700 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 CMA1P23946 247 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 PPIL2Q13356 520 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 DGKZQ13574 1117 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 COG2Q14746 738 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 STK38Q15208 465 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.264e-7■□□□□ 8.3
LINC00963-220ENST00000625171 EARS2Q5JPH6 523 aaKnown RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 AXDND1Q5T1B0 1012 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 MOXD1Q6UVY6 613 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 CATSPERGQ6ZRH7 1159 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 NAP1L4Q99733 375 aaKnown RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 TMOD4Q9NZQ9 345 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
LINC00963-220ENST00000625171 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 SRPRBQ9Y5M8 271 aaKnown RBP13.44□□□□□ -0.26
LINC00963-220ENST00000625171 ABCB11O95342 1321 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 MEIS2O14770 477 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 RAD21O60216 631 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 CUTAO60888 179 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 DSG3P32926 999 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP11P51784 963 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 PPP4R3AQ6IN85 833 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 CCDC84Q86UT8 332 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 FERMT2Q96AC1 680 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 RPAP3Q9H6T3 665 aaPredicted RBP13.43□□□□□ -0.26
LINC00963-220ENST00000625171 PCDHB6Q9Y5E3 794 aa13.43□□□□□ -0.26
LINC00963-220ENST00000625171 ZNF536O15090 1300 aa13.42□□□□□ -0.26
LINC00963-220ENST00000625171 IRF6O14896 467 aa13.42□□□□□ -0.26
LINC00963-220ENST00000625171 LETM1O95202 739 aaPredicted RBP13.42□□□□□ -0.26
LINC00963-220ENST00000625171 PRPHP41219 470 aa13.42□□□□□ -0.26
LINC00963-220ENST00000625171 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
LINC00963-220ENST00000625171 ELOA2Q8IYF1 753 aaPredicted RBP13.42□□□□□ -0.26
LINC00963-220ENST00000625171 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
LINC00963-220ENST00000625171 KIFC2Q96AC6 838 aa13.42□□□□□ -0.26
LINC00963-220ENST00000625171 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00963-220ENST00000625171 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
LINC00963-220ENST00000625171 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 VWA5AO00534 786 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 OPLAHO14841 1288 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ZBED4O75132 1171 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
LINC00963-220ENST00000625171 CYP3A7P24462 503 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ME1P48163 572 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 HMGCS2P54868 508 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ZYXQ15942 572 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms