RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 EPHX2P34913 555 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 TEX35Q5T0J7 233 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 TBC1D10CQ8IV04 446 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 CCDC42Q96M95 316 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 LUC7L2Q9Y383 392 aaKnown RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 P4HA1P13674 534 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 AKR1B1P15121 316 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 RAPGEF1Q13905 1077 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 SBK1Q52WX2 424 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 TMTC3Q6ZXV5 915 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 CTNND2Q9UQB3 1225 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
SRGAP2-217ENST00000624873 BRD1O95696 1058 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 PRPF4BQ13523 1007 aaKnown RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 ABI1Q8IZP0 508 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 RASGRP4Q8TDF6 673 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 NACC1Q96RE7 527 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 GPR75-ASB3A0A0A6YYF3 556 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 PSAPP07602 524 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 NELFCDQ8IXH7 590 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 LMBR1Q8WVP7 490 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 KRT19P08727 400 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 CETPP11597 493 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 KRT5P13647 590 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 TNNI1P19237 187 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 CXCL9Q07325 125 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 VWA3BQ502W6 1294 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 ZNF354CQ86Y25 554 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 KIF18AQ8NI77 898 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 PRPF6O94906 941 aaKnown RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 SREBF2Q12772 1141 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 MTMR6Q9Y217 621 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 AKT3Q9Y243 479 aa11.33□□□□□ -0.6
SRGAP2-217ENST00000624873 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 STAMQ92783 540 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 CASQ1P31415 396 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 SETQ01105 290 aaPredicted RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 MMP19Q99542 508 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 KIAA1024Q9UPX6 916 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 K7ENM7 598 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 MMP1P03956 469 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 KRT83P78385 493 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 DDR1Q08345 913 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 MTMR2Q13614 643 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 SERTAD1Q9UHV2 236 aa11.32□□□□□ -0.6
SRGAP2-217ENST00000624873 GSTTP1A0A1W2PQM5 241 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 CMA1P23946 247 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 NAA15Q9BXJ9 866 aaKnown RBP11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 ASB14A6NK59 587 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 GNAT1P11488 350 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 ABCD1P33897 745 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 PPP4CP60510 307 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 RPS6KC1Q96S38 1066 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 NEDD4P46934 1319 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 GNA14O95837 355 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 SNAP25P60880 206 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 GRM4Q14833 912 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 UBE2SQ16763 222 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 ODR4Q5SWX8 454 aa11.31□□□□□ -0.6
SRGAP2-217ENST00000624873 PGBD1Q96JS3 809 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms