RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 LAMP5Q9UJQ1 280 aa9.72□□□□□ -0.85
CDKL5-206ENST00000623610 TRIM17Q9Y577 477 aa9.72□□□□□ -0.85
CDKL5-206ENST00000623610 DCCP43146 1447 aa9.72□□□□□ -0.85
CDKL5-206ENST00000623610 FAM135BQ49AJ0 1406 aa9.72□□□□□ -0.85
CDKL5-206ENST00000623610 ANO9A1A5B4 782 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 C2orf72A6NCS6 295 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 TNFRSF21O75509 655 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 CYP17A1P05093 508 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 XPAP23025 273 aaPredicted RBP9.71□□□□□ -0.85
CDKL5-206ENST00000623610 SKOR1P84550 965 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 IFRD2Q12894 506 aaPredicted RBP9.71□□□□□ -0.85
CDKL5-206ENST00000623610 GRM3Q14832 879 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 BTNL9Q6UXG8 535 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 ZBTB46Q86UZ6 589 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 BAP1Q92560 729 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 PRAM1Q96QH2 718 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 ATP6V0A4Q9HBG4 840 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 ZFYVE28Q9HCC9 887 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 SLC30A1Q9Y6M5 507 aa9.71□□□□□ -0.85
CDKL5-206ENST00000623610 FAM221AA4D161 298 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 CLASP2O75122 1294 aaKnown RBP9.71□□□□□ -0.86
CDKL5-206ENST00000623610 SASH1O94885 1247 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 APBB3O95704 486 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 CYP1A2P05177 515 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 POLR2BP30876 1174 aaKnown RBP9.71□□□□□ -0.86
CDKL5-206ENST00000623610 ATP2B2Q01814 1243 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 PDE4BQ07343 736 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 RASA2Q15283 850 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 FASTKD5Q7L8L6 764 aaKnown RBP9.71□□□□□ -0.86
CDKL5-206ENST00000623610 SDCCAG8Q86SQ7 713 aaPredicted RBP9.71□□□□□ -0.86
CDKL5-206ENST00000623610 AFAP1L2Q8N4X5 818 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDKL5-206ENST00000623610 ST7Q9NRC1 585 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 CHMP5Q9NZZ3 219 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 ADAMTS1Q9UHI8 967 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 GPR52Q9Y2T5 361 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 MST1RQ04912 1400 aa9.71□□□□□ -0.86
CDKL5-206ENST00000623610 ATP5J2-PTCD1G3V325 749 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 COBLO75128 1261 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 FDX1P10109 184 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 GNAT2P19087 354 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 CCT5P48643 541 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 POLR2FP61218 127 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 FAM47EQ6ZV65 393 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 GALNT13Q8IUC8 556 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 MSANTD4Q8NCY6 345 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 NSUN6Q8TEA1 469 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 MFSD3Q96ES6 412 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 SEC16BQ96JE7 1060 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 YIPF2Q9BWQ6 316 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 ELAC1Q9H777 363 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 KCNQ5Q9NR82 932 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 PAPOLBQ9NRJ5 636 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 CPSF2Q9P2I0 782 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 WDR35Q9P2L0 1181 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 M0QX08 132 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 NDUFB5O43674 189 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 CSPG5O95196 566 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 LRRC74AQ0VAA2 488 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 CCDC178Q5BJE1 867 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 TTC39AQ5SRH9 613 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 STRA8Q7Z7C7 330 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 SUN5Q8TC36 379 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 RTF1Q92541 710 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 RABGGTAQ92696 567 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 CLMNQ96JQ2 1002 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 TCF7L2Q9NQB0 619 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 DDX20Q9UHI6 824 aaKnown RBP9.7□□□□□ -0.86
CDKL5-206ENST00000623610 PFDN2Q9UHV9 154 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 EFR3BQ9Y2G0 817 aa9.7□□□□□ -0.86
CDKL5-206ENST00000623610 PNMA6FA0A0J9YX94 578 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 CCDC66A2RUB6 948 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 XPOTO43592 962 aaKnown RBP9.69□□□□□ -0.86
CDKL5-206ENST00000623610 ABLIM3O94929 683 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 SKIV2L2P42285 1042 aaKnown RBP9.69□□□□□ -0.86
CDKL5-206ENST00000623610 HECTD3Q5T447 861 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 ABRAXAS1Q6UWZ7 409 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 BRINP3Q76B58 766 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 IQCA1Q86XH1 822 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 NIM1KQ8IY84 436 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 DDX21Q9NR30 783 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDKL5-206ENST00000623610 POGKQ9P215 609 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 BARX2Q9UMQ3 279 aaPredicted RBP9.69□□□□□ -0.86
CDKL5-206ENST00000623610 KIAA1024Q9UPX6 916 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 DLC1Q96QB1 1528 aa9.69□□□□□ -0.86
CDKL5-206ENST00000623610 ZBTB39O15060 712 aa9.68□□□□□ -0.86
CDKL5-206ENST00000623610 FOXD2O60548 495 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-206ENST00000623610 TMOD1P28289 359 aa9.68□□□□□ -0.86
CDKL5-206ENST00000623610 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
CDKL5-206ENST00000623610 LMNB2Q03252 620 aa9.68□□□□□ -0.86
CDKL5-206ENST00000623610 NAA30Q147X3 362 aaPredicted RBP9.68□□□□□ -0.86
CDKL5-206ENST00000623610 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
CDKL5-206ENST00000623610 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms