RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PPARAQ07869 468 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 CCDC174Q6PII3 467 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 CXCL17Q6UXB2 119 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
LINC00963-214ENST00000622680 TLK2Q86UE8 772 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 NEDD1Q8NHV4 660 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 PPM1EQ8WY54 764 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 MICAL3Q7RTP6 2002 aa13.03□□□□□ -0.32
LINC00963-214ENST00000622680 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
LINC00963-214ENST00000622680 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.33
LINC00963-214ENST00000622680 TLR3O15455 904 aaKnown RBP13.02□□□□□ -0.33
LINC00963-214ENST00000622680 MCCP23508 829 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 TFAP4Q01664 338 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 TNFAIP2Q03169 654 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 PDE4BQ07343 736 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 MUM1L1Q5H9M0 696 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 KCTD1Q719H9 257 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-214ENST00000622680 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 FSD1Q9BTV5 496 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 NAPBQ9H115 298 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 INCENPQ9NQS7 918 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
LINC00963-214ENST00000622680 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
LINC00963-214ENST00000622680 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 FOXP2O15409 715 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 CD4P01730 458 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 SLC1A4P43007 532 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 PSMC6P62333 389 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
LINC00963-214ENST00000622680 PSRC1Q6PGN9 363 aaPredicted RBP13.01□□□□□ -0.33
LINC00963-214ENST00000622680 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 PURBQ96QR8 312 aaKnown RBP13.01□□□□□ -0.33
LINC00963-214ENST00000622680 NACAP1Q9BZK3 213 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 PDGFCQ9NRA1 345 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 GNEQ9Y223 722 aaKnown RBP13.01□□□□□ -0.33
LINC00963-214ENST00000622680 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
LINC00963-214ENST00000622680 GRIN2DO15399 1336 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 SMPD1P17405 629 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 ZMYM1Q5SVZ6 1142 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 NSMFQ6X4W1 530 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 FAM160B2Q86V87 743 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 CHURC1Q8WUH1 139 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 GMCL1Q96IK5 515 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
LINC00963-214ENST00000622680 HIPK3Q9H422 1215 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 IL23AQ9NPF7 189 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
LINC00963-214ENST00000622680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.332e-8■■■■■ 48.5
LINC00963-214ENST00000622680 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 ASB14A6NK59 587 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 TSPY2A6NKD2 308 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 B4GALT4O60513 344 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 SLC3A2P08195 630 aaKnown RBP12.99□□□□□ -0.33
LINC00963-214ENST00000622680 FDX1P10109 184 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 CCL23P55773 120 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 NKX3-2P78367 333 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 TJAP1Q5JTD0 557 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 SLC43A3Q8NBI5 491 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
LINC00963-214ENST00000622680 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 NKX2-4Q9H2Z4 354 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 CYP39A1Q9NYL5 469 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 CCPG1Q9ULG6 757 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
LINC00963-214ENST00000622680 LOXHD1Q8IVV2 1947 aa12.99□□□□□ -0.33
LINC00963-214ENST00000622680 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
LINC00963-214ENST00000622680 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 CCDC85BQ15834 202 aaPredicted RBP12.98□□□□□ -0.33
LINC00963-214ENST00000622680 TKFCQ3LXA3 575 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 VPS53Q5VIR6 699 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 TAPT1Q6NXT6 567 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 HERVK_113Q902F9 699 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
LINC00963-214ENST00000622680 SCLYQ96I15 445 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
LINC00963-214ENST00000622680 ERC2O15083 957 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
LINC00963-214ENST00000622680 MX1P20591 662 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 SLC16A2P36021 539 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 RABGGTBP53611 331 aa12.97□□□□□ -0.33
LINC00963-214ENST00000622680 RAB30Q15771 203 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms