RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 C9orf50Q5SZB4 431 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 RCSD1Q6JBY9 416 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.71■■□□□ 1.55
PMPCA-212ENST00000622209 RASGRP2Q7LDG7 609 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 ANKS1AQ92625 1134 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 TMEM47Q9BQJ4 181 aa24.71■■□□□ 1.55
PMPCA-212ENST00000622209 TSEN34Q9BSV6 310 aaKnown RBP24.71■■□□□ 1.55
PMPCA-212ENST00000622209 ZNFX1Q9P2E3 1918 aaKnown RBP24.71■■□□□ 1.55
PMPCA-212ENST00000622209 MYADML2A6NDP7 307 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 POTEB2H3BUK9 544 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 SLC27A2O14975 620 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 CLTBP09497 229 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 CREB3L3Q68CJ9 461 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 CCDC174Q6PII3 467 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 ARMCX2Q7L311 632 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 KLHDC9Q8NEP7 349 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 NCOA7Q8NI08 942 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 ZSCAN10Q96SZ4 725 aaPredicted RBP24.7■■□□□ 1.54
PMPCA-212ENST00000622209 ZKSCAN3Q9BRR0 538 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 ACAD9Q9H845 621 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 RNF146Q9NTX7 359 aa24.7■■□□□ 1.54
PMPCA-212ENST00000622209 ZNF536O15090 1300 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 DUSP11O75319 330 aaKnown RBP24.69■■□□□ 1.54
PMPCA-212ENST00000622209 ALAS1P13196 640 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 ITGB8P26012 769 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 CCDC144BQ3MJ40 725 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 RNF20Q5VTR2 975 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 RALYLQ86SE5 291 aaKnown RBP24.69■■□□□ 1.54
PMPCA-212ENST00000622209 CCDC144CPQ8IYA2 1237 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 FAM161BQ96MY7 647 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 UBAC1Q9BSL1 405 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 ABHD16BQ9H3Z7 469 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 STARD7Q9NQZ5 370 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 TAF6LQ9Y6J9 622 aa24.69■■□□□ 1.54
PMPCA-212ENST00000622209 ADCY6O43306 1168 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 REC8O95072 547 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 CCSAPQ6IQ19 270 aaPredicted RBP24.68■■□□□ 1.54
PMPCA-212ENST00000622209 STOX1Q6ZVD7 989 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 NUP133Q8WUM0 1156 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 TRERF1Q96PN7 1200 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 A1CFQ9NQ94 594 aaKnown RBP24.68■■□□□ 1.54
PMPCA-212ENST00000622209 TMEM39AQ9NV64 488 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 STXBP5LQ9Y2K9 1186 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 A0A0C4DFX4 3053 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 SMCHD1A6NHR9 2005 aa24.68■■□□□ 1.54
PMPCA-212ENST00000622209 PLA2G6O60733 806 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 C6orf222P0C671 652 aaPredicted RBP24.67■■□□□ 1.54
PMPCA-212ENST00000622209 CCDC96Q2M329 555 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 CYB5R4Q7L1T6 521 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 FAM133AQ8N9E0 248 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 DCAF4Q8WV16 495 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 PRR12Q9ULL5 1215 aa24.67■■□□□ 1.54
PMPCA-212ENST00000622209 TNKSO95271 1327 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 SOWAHBA6NEL2 793 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 MOXD2PA6NHM9 499 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 RAG1P15918 1043 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 TKFCQ3LXA3 575 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 ENAHQ8N8S7 591 aaPredicted RBP24.66■■□□□ 1.54
PMPCA-212ENST00000622209 VTI1AQ96AJ9 217 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 SPC25Q9HBM1 224 aa24.66■■□□□ 1.54
PMPCA-212ENST00000622209 DCDC2CA8MYV0 355 aa24.65■■□□□ 1.54
PMPCA-212ENST00000622209 KIAA0355O15063 1070 aa24.65■■□□□ 1.54
PMPCA-212ENST00000622209 EPB41L2O43491 1005 aaKnown RBP24.65■■□□□ 1.54
PMPCA-212ENST00000622209 FAAP100Q0VG06 881 aa24.65■■□□□ 1.54
PMPCA-212ENST00000622209 MUM1L1Q5H9M0 696 aa24.65■■□□□ 1.54
PMPCA-212ENST00000622209 FAM109BQ6ICB4 259 aaPredicted RBP24.65■■□□□ 1.54
PMPCA-212ENST00000622209 NOL8Q76FK4 1167 aaKnown RBP24.65■■□□□ 1.54
PMPCA-212ENST00000622209 KAT14Q9H8E8 782 aa24.65■■□□□ 1.54
PMPCA-212ENST00000622209 DDX49Q9Y6V7 483 aaKnown RBP24.65■■□□□ 1.54
PMPCA-212ENST00000622209 ASGR1P07306 291 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 SLC16A2P36021 539 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 EPHB4P54760 987 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 GJA9P57773 515 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 SART3Q15020 963 aaKnown RBP24.64■■□□□ 1.54
PMPCA-212ENST00000622209 TSGA10IPQ3SY00 556 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 GNASQ5JWF2 1037 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 TTBK2Q6IQ55 1244 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 ANKRD33Q7Z3H0 272 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 MB21D2Q8IYB1 491 aaPredicted RBP24.64■■□□□ 1.54
PMPCA-212ENST00000622209 GLT1D1Q96MS3 346 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 KATNBL1Q9H079 304 aa24.64■■□□□ 1.54
PMPCA-212ENST00000622209 PLXNA1Q9UIW2 1896 aa24.64■■□□□ 1.53
PMPCA-212ENST00000622209 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.63■■□□□ 1.53
PMPCA-212ENST00000622209 ERICH2A1L162 156 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 CST5P28325 142 aaPredicted RBP24.63■■□□□ 1.53
PMPCA-212ENST00000622209 SEC23AQ15436 765 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 IFIT1BQ5T764 474 aaKnown RBP24.63■■□□□ 1.53
PMPCA-212ENST00000622209 PCSK9Q8NBP7 692 aaKnown RBP24.63■■□□□ 1.53
PMPCA-212ENST00000622209 PNMA1Q8ND90 353 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 TOX2Q96NM4 488 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 GUCD1Q96NT3 240 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 MTA3Q9BTC8 594 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 UPF3AQ9H1J1 476 aaKnown RBP24.63■■□□□ 1.53
PMPCA-212ENST00000622209 CCPG1Q9ULG6 757 aa24.63■■□□□ 1.53
PMPCA-212ENST00000622209 ASB14A6NK59 587 aa24.62■■□□□ 1.53
PMPCA-212ENST00000622209 IFIT3O14879 490 aaKnown RBP24.62■■□□□ 1.53
PMPCA-212ENST00000622209 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
PMPCA-212ENST00000622209 PDHBP11177 359 aa24.62■■□□□ 1.53
PMPCA-212ENST00000622209 TNFAIP2Q03169 654 aa24.62■■□□□ 1.53
PMPCA-212ENST00000622209 NSMFQ6X4W1 530 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms