RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MUM1L1Q5H9M0 696 aa21.54■■□□□ 1.04
CIRBP-245ENST00000621399 DDX11Q96FC9 970 aa21.54■■□□□ 1.04
CIRBP-245ENST00000621399 ZNF274Q96GC6 653 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-245ENST00000621399 AMNQ9BXJ7 453 aa21.54■■□□□ 1.04
CIRBP-245ENST00000621399 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-245ENST00000621399 ADCY3O60266 1144 aa21.53■■□□□ 1.04
CIRBP-245ENST00000621399 CCT2P78371 535 aaKnown RBP21.53■■□□□ 1.04
CIRBP-245ENST00000621399 SLC5A4Q9NY91 659 aa21.53■■□□□ 1.04
CIRBP-245ENST00000621399 SEC63Q9UGP8 760 aaKnown RBP21.53■■□□□ 1.04
CIRBP-245ENST00000621399 MGAMO43451 1857 aa21.53■■□□□ 1.04
CIRBP-245ENST00000621399 ABCB11O95342 1321 aa21.53■■□□□ 1.04
CIRBP-245ENST00000621399 PPP1R11O60927 126 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-245ENST00000621399 PGK2P07205 417 aa21.52■■□□□ 1.04
CIRBP-245ENST00000621399 XRCC5P13010 732 aaKnown RBP21.52■■□□□ 1.04
CIRBP-245ENST00000621399 TRAF1Q13077 416 aa21.52■■□□□ 1.04
CIRBP-245ENST00000621399 STK3Q13188 491 aa21.52■■□□□ 1.04
CIRBP-245ENST00000621399 NOL8Q76FK4 1167 aaKnown RBP21.52■■□□□ 1.04
CIRBP-245ENST00000621399 APBA2Q99767 749 aa21.52■■□□□ 1.04
CIRBP-245ENST00000621399 PCDHA1Q9Y5I3 950 aa21.52■■□□□ 1.04
CIRBP-245ENST00000621399 COBLO75128 1261 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 HOXC6P09630 235 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 ELNP15502 786 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 GRK4P32298 578 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 RABEP1Q15276 862 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 SLC9C1Q4G0N8 1177 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 NSMFQ6X4W1 530 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.51■■□□□ 1.03
CIRBP-245ENST00000621399 SLAIN1Q8ND83 568 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 PXYLP1Q8TE99 480 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 CLEC4DQ8WXI8 215 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
CIRBP-245ENST00000621399 A1CFQ9NQ94 594 aaKnown RBP21.51■■□□□ 1.03
CIRBP-245ENST00000621399 TPCN1Q9ULQ1 816 aa21.51■■□□□ 1.03
CIRBP-245ENST00000621399 MRPL11Q9Y3B7 192 aaKnown RBP21.51■■□□□ 1.03
CIRBP-245ENST00000621399 NID2Q14112 1375 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 hCG_1642624A0A1W2PR95 340 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 NFIBO00712 420 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 FUT2Q10981 343 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 SH3TC2Q8TF17 1288 aa21.5■■□□□ 1.03
CIRBP-245ENST00000621399 SLKQ9H2G2 1235 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-245ENST00000621399 BIN2Q9UBW5 565 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-245ENST00000621399 CCL14Q16627 93 aa21.49■■□□□ 1.03
CIRBP-245ENST00000621399 TRMT44Q8IYL2 757 aaKnown RBP21.49■■□□□ 1.03
CIRBP-245ENST00000621399 CYP39A1Q9NYL5 469 aa21.49■■□□□ 1.03
CIRBP-245ENST00000621399 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-245ENST00000621399 PFASO15067 1338 aa21.49■■□□□ 1.03
CIRBP-245ENST00000621399 CNTNAP5Q8WYK1 1306 aa21.49■■□□□ 1.03
CIRBP-245ENST00000621399 PTPDC1A2A3K4 754 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 POTEB2H3BUK9 544 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 CPLX1O14810 134 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 ZNF792Q3KQV3 632 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 RNF207Q6ZRF8 634 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 MCF2L2Q86YR7 1114 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 TRIB2Q92519 343 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
CIRBP-245ENST00000621399 DNAJC25-GNG10A0A024R161 153 aa21.47■■□□□ 1.03
CIRBP-245ENST00000621399 PFKFB2O60825 505 aa21.47■■□□□ 1.03
CIRBP-245ENST00000621399 BAATQ14032 418 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-245ENST00000621399 CPLX2Q6PUV4 134 aaKnown RBP21.47■■□□□ 1.03
CIRBP-245ENST00000621399 RGS22Q8NE09 1264 aa21.47■■□□□ 1.03
CIRBP-245ENST00000621399 MAML3Q96JK9 1138 aa21.47■■□□□ 1.03
CIRBP-245ENST00000621399 DIS3Q9Y2L1 958 aaKnown RBP21.47■■□□□ 1.03
CIRBP-245ENST00000621399 ST18O60284 1047 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 HMGCRP04035 888 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 IFNAR1P17181 557 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 CALML3P27482 149 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 AKAP17AQ02040 695 aaKnown RBP21.46■■□□□ 1.03
CIRBP-245ENST00000621399 CNTN2Q02246 1040 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 SCRN1Q12765 414 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 NTRK3Q16288 839 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 ME3Q16798 604 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 HEATR3Q7Z4Q2 680 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 PHKBQ93100 1093 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 FLRT1Q9NZU1 646 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 LIMCH1Q9UPQ0 1083 aa21.46■■□□□ 1.03
CIRBP-245ENST00000621399 PLXNB2O15031 1838 aa21.45■■□□□ 1.03
CIRBP-245ENST00000621399 HTTP42858 3142 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 DOCK3Q8IZD9 2030 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 INHAP05111 366 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 RPS6P62753 249 aaKnown RBP21.45■■□□□ 1.02
CIRBP-245ENST00000621399 UBXN2AP68543 259 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 MFSD14CQ5VZR4 134 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 OLFML2BQ68BL8 750 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 SLC30A10Q6XR72 485 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 FAM133AQ8N9E0 248 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 IL27Q8NEV9 243 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 TBC1D5Q92609 795 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 ARMC5Q96C12 935 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 SLC26A6Q9BXS9 759 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 MAF1Q9H063 256 aa21.45■■□□□ 1.02
CIRBP-245ENST00000621399 ZNF236Q9UL36 1845 aa21.44■■□□□ 1.02
CIRBP-245ENST00000621399 PRPF3O43395 683 aaKnown RBP21.44■■□□□ 1.02
CIRBP-245ENST00000621399 PPFIA3O75145 1194 aa21.44■■□□□ 1.02
CIRBP-245ENST00000621399 CFBP00751 764 aa21.44■■□□□ 1.02
CIRBP-245ENST00000621399 MYCP01106 439 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-245ENST00000621399 NECAB1Q8N987 351 aa21.44■■□□□ 1.02
CIRBP-245ENST00000621399 GPKOWQ92917 476 aaPredicted RBP eCLIP21.44■■□□□ 1.025e-13■□□□□ 10.6
CIRBP-245ENST00000621399 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
CIRBP-245ENST00000621399 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms