RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 OTOFQ9HC10 1997 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 CAMK4Q16566 473 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 FAM160B2Q86V87 743 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 LDHDQ86WU2 507 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 CCAR1Q8IX12 1150 aaKnown RBP18.18■□□□□ 0.5
CBWD3-216ENST00000621396 KCNG4Q8TDN1 519 aa18.18■□□□□ 0.5
CBWD3-216ENST00000621396 ZNF536O15090 1300 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 PHIPQ8WWQ0 1821 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 MEIS2O14770 477 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 CELF2O95319 508 aaKnown RBP18.17■□□□□ 0.5
CBWD3-216ENST00000621396 PTGDRQ13258 359 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 GALNT17Q6IS24 598 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 ARMC9Q7Z3E5 817 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-216ENST00000621396 DACT1Q9NYF0 836 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 ESYT2A0FGR8 921 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 MBD3O95983 291 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 CFBP00751 764 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-216ENST00000621396 GADL1Q6ZQY3 521 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.17■□□□□ 0.5
CBWD3-216ENST00000621396 PPP1R9AQ9ULJ8 1098 aa18.17■□□□□ 0.5
CBWD3-216ENST00000621396 NOL7Q9UMY1 257 aaKnown RBP18.17■□□□□ 0.5
CBWD3-216ENST00000621396 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
CBWD3-216ENST00000621396 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
CBWD3-216ENST00000621396 GJA5P36382 358 aa18.16■□□□□ 0.5
CBWD3-216ENST00000621396 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
CBWD3-216ENST00000621396 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.5
CBWD3-216ENST00000621396 CCPG1Q9ULG6 757 aa18.16■□□□□ 0.5
CBWD3-216ENST00000621396 EDIL3O43854 480 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 CLK2P49760 499 aaKnown RBP18.15■□□□□ 0.5
CBWD3-216ENST00000621396 FCHSD1Q86WN1 690 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 ADALQ6DHV7 355 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 USP49Q70CQ1 688 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 FSIP1Q8NA03 581 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-216ENST00000621396 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 TMEM60Q9H2L4 133 aa18.15■□□□□ 0.5
CBWD3-216ENST00000621396 SYCE3A1L190 88 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 SPDYE5A6NIY4 337 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 VWA5AO00534 786 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 PLA2G6O60733 806 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 ALAS1P13196 640 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 NDUFA8P51970 172 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 PPATQ06203 517 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 MAP3K11Q16584 847 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 CST9Q5W186 159 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 SHC4Q6S5L8 630 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 GJA10Q969M2 543 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 SLC38A10Q9HBR0 1119 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 RIPK3Q9Y572 518 aa18.14■□□□□ 0.5
CBWD3-216ENST00000621396 NFIBO00712 420 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 UBXN2AP68543 259 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 LDLRAD1Q5T700 205 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 PPP1R18Q6NYC8 613 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 SLC10A4Q96EP9 437 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 C12orf42Q96LP6 360 aa18.14■□□□□ 0.49
CBWD3-216ENST00000621396 TDP2O95551 362 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 CDC25AP30304 524 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 POTEEQ6S8J3 1075 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 ERCC4Q92889 916 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-216ENST00000621396 FBXO2Q9UK22 296 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-216ENST00000621396 VWA3AA6NCI4 1184 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 PPP6R2O75170 966 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 ICAM1P05362 532 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 PLS1Q14651 629 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 COG2Q14746 738 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 IL17AQ16552 155 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 NEK8Q86SG6 692 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
CBWD3-216ENST00000621396 RBM46Q8TBY0 533 aaKnown RBP18.13■□□□□ 0.49
CBWD3-216ENST00000621396 CSRNP2Q9H175 543 aa18.13■□□□□ 0.49
CBWD3-216ENST00000621396 GBA2Q9HCG7 927 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-216ENST00000621396 SNW1Q13573 536 aaKnown RBP18.12■□□□□ 0.49
CBWD3-216ENST00000621396 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-216ENST00000621396 PAPPA2Q9BXP8 1791 aa18.12■□□□□ 0.49
CBWD3-216ENST00000621396 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-216ENST00000621396 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
CBWD3-216ENST00000621396 PURBQ96QR8 312 aaKnown RBP18.12■□□□□ 0.49
CBWD3-216ENST00000621396 SLC37A4O43826 429 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 DSG3P32926 999 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 TMEM132BQ14DG7 1078 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 C4orf32Q8N8J7 132 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 MRPS27Q92552 414 aaKnown RBP18.11■□□□□ 0.49
CBWD3-216ENST00000621396 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 A0A0G2JLL6 359 aaPredicted RBP18.11■□□□□ 0.49
CBWD3-216ENST00000621396 SPDYE16A6NNV3 312 aaPredicted RBP18.11■□□□□ 0.49
CBWD3-216ENST00000621396 PFKFB1P16118 471 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 PTPREP23469 700 aa18.11■□□□□ 0.49
CBWD3-216ENST00000621396 PRRT2Q7Z6L0 340 aaPredicted RBP18.11■□□□□ 0.49
CBWD3-216ENST00000621396 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms