RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 CCDC127Q96BQ5 260 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 NKIRAS1Q9NYS0 192 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 CYP26C1Q6V0L0 522 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 ATRIPQ8WXE1 791 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 NUCKS1Q9H1E3 243 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 COPRSQ9NQ92 184 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 ASIC3Q9UHC3 531 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 RIPOR2Q9Y4F9 1068 aa10.77□□□□□ -0.69
CLTCL1-211ENST00000621271 RIMS1Q86UR5 1692 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 MYL3P08590 195 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF75DP51815 510 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 HADHQ16836 314 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 NBPF11Q86T75 865 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 STAMQ92783 540 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF341Q9BYN7 854 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 WDR11Q9BZH6 1224 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 BLZF1Q9H2G9 400 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ZWINTO95229 277 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ATP5DP30049 168 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 TXNRD1Q16881 649 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 TTC31Q49AM3 519 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 LGSNQ5TDP6 509 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 SFMBT2Q5VUG0 894 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 APOBEC3FQ8IUX4 373 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 KDM5CP41229 1560 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ANKS4BQ8N8V4 417 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 SNX25Q9H3E2 840 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 KIF9Q9HAQ2 790 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 JCADQ9P266 1359 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF202O95125 648 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 BRD1O95696 1058 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 FGAP02671 866 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 GNAT1P11488 350 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ADORA1P30542 326 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 HSPA1LP34931 641 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 STAT1P42224 750 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 SYCE1Q8N0S2 351 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 MRRFQ96E11 262 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 GPR108Q9NPR9 543 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 NARFQ9UHQ1 456 aa10.76□□□□□ -0.69
CLTCL1-211ENST00000621271 ROBO2Q9HCK4 1378 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 HEG1Q9ULI3 1381 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 M0R2C6 588 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 EBAG9O00559 213 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 EVCP57679 992 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 VPS52Q8N1B4 723 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 UBLCP1Q8WVY7 318 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 MAIP1Q8WWC4 291 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF274Q96GC6 653 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ANKRD36BP1Q96IX9 119 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 TAB2Q9NYJ8 693 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 LMCD1Q9NZU5 365 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ARMCX3Q9UH62 379 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 FBXO40Q9UH90 709 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 NOSTRINQ8IVI9 506 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 C10orf67Q8IYJ2 551 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 MAGEA1P43355 309 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 SARNPP82979 210 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 R3HDM1Q15032 1099 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 HDXQ7Z353 690 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 SYNE4Q8N205 404 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 MICALL1Q8N3F8 863 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 RYBPQ8N488 228 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ARFGAP2Q8N6H7 521 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 CCDC110Q8TBZ0 833 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 HAUS1Q96CS2 278 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 DISC1Q9NRI5 854 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 HOXC10Q9NYD6 342 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 SLC8A2Q9UPR5 921 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ZHX2Q9Y6X8 837 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 CACTINQ8WUQ7 758 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 SLC12A6Q9UHW9 1150 aa10.75□□□□□ -0.69
CLTCL1-211ENST00000621271 ATP8B3O60423 1300 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 SYNJ2BP-COX16A0A087WUM0 186 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 KRT10P13645 584 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 MFSD14CQ5VZR4 134 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF449Q6P9G9 518 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 CBX8Q9HC52 389 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 COX16Q9P0S2 106 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 UTP11Q9Y3A2 253 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ZMYM6O95789 1325 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 IGSF1Q8N6C5 1336 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 HSPA4P34932 840 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 SLC16A2P36021 539 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms