RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TADA3O75528 432 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 IVNS1ABPQ9Y6Y0 642 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SH3TC1Q8TE82 1336 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 CHL1O00533 1208 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 ZBTB7AO95365 584 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 CLCN6P51797 869 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 APBA1Q02410 837 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SNX1Q13596 522 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 DNAJC10Q8IXB1 793 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 TXLNGQ9NUQ3 528 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
COL4A6-210ENST00000621266 KCNJ18B7U540 433 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 H0Y3Z8 333 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 ATF2P15336 505 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 ASPHQ12797 758 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 NNTQ13423 1086 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 KCNJ12Q14500 433 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 G2E3Q7L622 706 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SMCR8Q8TEV9 937 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 GRK7Q8WTQ7 553 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 EXOC4Q96A65 974 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 PAGR1Q9BTK6 254 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SLC52A2Q9HAB3 445 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 GPCPD1Q9NPB8 672 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 CCDC159P0C7I6 412 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 CDR2Q01850 454 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 GRAMD1BQ3KR37 738 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SLC35F6Q8N357 371 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 POMGNT1Q8WZA1 660 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 BZW2Q9Y6E2 419 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 EIF3CLB5ME19 914 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 EYA2O00167 538 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 HIBADHP31937 336 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 RAP1GDS1P52306 607 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 LMNB2Q03252 620 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 GAS2L3Q86XJ1 694 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 KIAA2013Q8IYS2 634 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 HDAC11Q96DB2 347 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 CCDC51Q96ER9 411 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 EIF3CQ99613 913 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SERTAD1Q9UHV2 236 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 LZTS1Q9Y250 596 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 DYNC1I2Q13409 638 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 OR8K1Q8NGG5 319 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 B4E1Z4 1266 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 ZBTB7BO15156 539 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-210ENST00000621266 TAF12Q16514 161 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SPC25Q9HBM1 224 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 EPB41L5Q9HCM4 733 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 SMYD2Q9NRG4 433 aa10.8□□□□□ -0.68
COL4A6-210ENST00000621266 KRT14P02533 472 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 BCRP11274 1271 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 GFAPP14136 432 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 PSMC1P62191 440 aaKnown RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 GJC2Q5T442 439 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 KDM2BQ8NHM5 1336 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 BACH1O14867 736 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 ZBTB22O15209 634 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 ARHGEF9O43307 516 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 PTPN21Q16825 1174 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 TMTC4Q5T4D3 741 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 KAZNQ674X7 775 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 NRBF2Q96F24 287 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 DENND2AQ9ULE3 1009 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 ATF7P17544 494 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 TMED2Q15363 201 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 TERF2Q15554 542 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 HIPK4Q8NE63 616 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 TYW1Q9NV66 732 aaKnown RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 CAPN11Q9UMQ6 739 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 KIF1CO43896 1103 aaKnown RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 SLCO1A2P46721 670 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 FBXO18Q8NFZ0 1043 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 RAB20Q9NX57 234 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 KDM1AO60341 852 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 DKC1O60832 514 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 WBP4O75554 376 aaKnown RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 GCNT3O95395 438 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 MORC3Q14149 939 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 NME8Q8N427 588 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 POLR3CQ9BUI4 534 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-210ENST00000621266 PARD6BQ9BYG5 372 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 JAK2O60674 1132 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 DEXIO95424 95 aa10.79□□□□□ -0.68
COL4A6-210ENST00000621266 FOXD4Q12950 439 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms