RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 COL25A1Q9BXS0 654 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-222ENST00000620505 PPP1R12CQ9BZL4 782 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
TARDBP-222ENST00000620505 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-222ENST00000620505 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
TARDBP-222ENST00000620505 LAMA3Q16787 3333 aa10.38□□□□□ -0.75
TARDBP-222ENST00000620505 ACRP10323 421 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 SLC16A2P36021 539 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 GJA9P57773 515 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 TNFAIP2Q03169 654 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 TMEM63BQ5T3F8 832 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 NSMFQ6X4W1 530 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 ANKRD33Q7Z3H0 272 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 FAM160B2Q86V87 743 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 PCSK9Q8NBP7 692 aaKnown RBP10.37□□□□□ -0.75
TARDBP-222ENST00000620505 MAFAQ8NHW3 353 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-222ENST00000620505 KIF12Q96FN5 646 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 GMCL1Q96IK5 515 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.753e-6■□□□□ 10.1
TARDBP-222ENST00000620505 KATNBL1Q9H079 304 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 PDGFCQ9NRA1 345 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
TARDBP-222ENST00000620505 ASTN1O14525 1302 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 ARVCFO00192 962 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 CTAGE5O15320 804 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 DYNC1LI2O43237 492 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 TIMP1P01033 207 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 FOSL2P15408 326 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 CST5P28325 142 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 CDK7P50613 346 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 RCSD1Q6JBY9 416 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 FBXO16Q8IX29 292 aaPredicted RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 FAM227BQ96M60 508 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 TOX2Q96NM4 488 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 UPF3AQ9H1J1 476 aaKnown RBP10.36□□□□□ -0.75
TARDBP-222ENST00000620505 GPCPD1Q9NPB8 672 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 TBX21Q9UL17 535 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 CCPG1Q9ULG6 757 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 SYNPO2Q9UMS6 1093 aa10.36□□□□□ -0.75
TARDBP-222ENST00000620505 ELP1O95163 1332 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 SALL3Q9BXA9 1300 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 A0A0D9SFI3 127 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-222ENST00000620505 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 FDX1P10109 184 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 CSF2RAP15509 400 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 SMPD1P17405 629 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 CYP2C18P33260 490 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 HAND2P61296 217 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 PSMC6P62333 389 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 GRIN2CQ14957 1233 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 MFSD5Q6N075 450 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 C16orf59Q7L2K0 433 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 TLK2Q86UE8 772 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 EVI5LQ96CN4 794 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 AP5M1Q9H0R1 490 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 MCM3APO60318 1980 aa10.35□□□□□ -0.75
TARDBP-222ENST00000620505 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 MROH7Q68CQ1 1323 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-222ENST00000620505 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-222ENST00000620505 ASB14A6NK59 587 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 TLR3O15455 904 aaKnown RBP10.34□□□□□ -0.75
TARDBP-222ENST00000620505 DNAJB2P25686 324 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 PBX2P40425 430 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 PDE1AP54750 535 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 NMIQ13287 307 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-222ENST00000620505 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 TMEM240Q5SV17 173 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 ZNF365Q70YC5 407 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 CYP39A1Q9NYL5 469 aa10.34□□□□□ -0.75
TARDBP-222ENST00000620505 GNEQ9Y223 722 aaKnown RBP10.34□□□□□ -0.75
TARDBP-222ENST00000620505 PTPDC1A2A3K4 754 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 NFIBO00712 420 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 PLA2G6O60733 806 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 FGAP02671 866 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 CCL23P55773 120 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 PPIGQ13427 754 aaKnown RBP eCLIP10.33□□□□□ -0.76
TARDBP-222ENST00000620505 ITGA7Q13683 1181 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 BAATQ14032 418 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-222ENST00000620505 FSCN1Q16658 493 aaKnown RBP10.33□□□□□ -0.76
TARDBP-222ENST00000620505 PPP4R3BQ5MIZ7 849 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 SYDE2Q5VT97 1194 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 TAPT1Q6NXT6 567 aa10.33□□□□□ -0.76
TARDBP-222ENST00000620505 KIAA1211Q6ZU35 1233 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms