RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 RASSF4Q9H2L5 321 aa8.71□□□□□ -1.02
TVP23A-211ENST00000619408 JMJD4Q9H9V9 463 aa8.71□□□□□ -1.02
TVP23A-211ENST00000619408 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.71□□□□□ -1.02
TVP23A-211ENST00000619408 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF112Q9UJU3 913 aa8.71□□□□□ -1.02
TVP23A-211ENST00000619408 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
TVP23A-211ENST00000619408 CLIC4Q9Y696 253 aa8.71□□□□□ -1.02
TVP23A-211ENST00000619408 SMCO2A6NFE2 343 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 TRIM75PA6NK02 468 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 TMEM232C9JQI7 657 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 ADM5C9JUS6 153 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 WDR46O15213 610 aaKnown RBP8.7□□□□□ -1.02
TVP23A-211ENST00000619408 INPP5BP32019 993 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 TRAPPC10P48553 1259 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 USP14P54578 494 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 NOLC1Q14978 699 aaKnown RBP eCLIP8.7□□□□□ -1.02
TVP23A-211ENST00000619408 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
TVP23A-211ENST00000619408 FAM83BQ5T0W9 1011 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 PRAMEF18Q5VWM3 479 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 BTNL9Q6UXG8 535 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC73Q6ZRK6 1079 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 PIK3AP1Q6ZUJ8 805 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 KRT25Q7Z3Z0 450 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 PNMA8AQ86V59 439 aaPredicted RBP8.7□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 LINC00301Q8NCQ3 95 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 CHURC1Q8WUH1 139 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 TNFRSF25Q93038 417 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 MTMR8Q96EF0 704 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 GLT8D2Q9H1C3 349 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 USP25Q9UHP3 1055 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 SCN4AP35499 1836 aa8.7□□□□□ -1.02
TVP23A-211ENST00000619408 VGLL3A8MV65 326 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 PLA2G6O60733 806 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 PPP6R2O75170 966 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 TUBB4AP04350 444 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 SATB1Q01826 763 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 SLC39A14Q15043 492 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 NPY5RQ15761 445 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 QRICH1Q2TAL8 776 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 TTC38Q5R3I4 469 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 NOL9Q5SY16 702 aaKnown RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC183Q5T5S1 534 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 REXO1Q8N1G1 1221 aaKnown RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 CUL5Q93034 780 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 WDR18Q9BV38 432 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 AMNQ9BXJ7 453 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 GLIS2Q9BZE0 524 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 TAF1DQ9H5J8 278 aaPredicted RBP8.69□□□□□ -1.02
TVP23A-211ENST00000619408 FEM1BQ9UK73 627 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 CSADQ9Y600 493 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 TCHHQ07283 1943 aa8.69□□□□□ -1.02
TVP23A-211ENST00000619408 A0A1W2PQ27 194 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 A0A1W2PQ64 194 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 A0A1W2PQD8 194 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 KIF3CO14782 793 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ATP8B1O43520 1251 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC172P0C7W6 258 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PTPRAP18433 802 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 IREB2P48200 963 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 TOB1P50616 345 aaPredicted RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 GTF2A1P52655 376 aaPredicted RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 MRPL12P52815 198 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 MTMR2Q13614 643 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PRKG1Q13976 671 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 NONOQ15233 471 aaKnown RBP eCLIP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ZSCAN23Q3MJ62 389 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 KIAA1755Q5JYT7 1200 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ICE2Q659A1 982 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ADALQ6DHV7 355 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC91Q7Z6B0 441 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 FSIP1Q8NA03 581 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 RASGRP4Q8TDF6 673 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 MRPS27Q92552 414 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 ZKSCAN4Q969J2 545 aaPredicted RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 KIFC2Q96AC6 838 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 COA7Q96BR5 231 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 CDCA5Q96FF9 252 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PGBD1Q96JS3 809 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 TANGO6Q9C0B7 1094 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 RIC8AQ9NPQ8 531 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 DDX19AQ9NUU7 478 aaKnown RBP8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PCDHA6Q9UN73 950 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PCDHB6Q9Y5E3 794 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 PCDHA8Q9Y5H6 950 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms