RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 NUP88Q99567 741 aaPredicted RBP21.55■■□□□ 1.04
PSPC1-206ENST00000619300 MTRQ99707 1265 aa21.55■■□□□ 1.04
PSPC1-206ENST00000619300 TMEM39BQ9GZU3 492 aa21.55■■□□□ 1.04
PSPC1-206ENST00000619300 IFNKQ9P0W0 207 aa21.55■■□□□ 1.04
PSPC1-206ENST00000619300 PCDHA1Q9Y5I3 950 aa21.55■■□□□ 1.04
PSPC1-206ENST00000619300 CD2APQ9Y5K6 639 aa21.55■■□□□ 1.04
PSPC1-206ENST00000619300 GTPBP6O43824 516 aaPredicted RBP21.54■■□□□ 1.04
PSPC1-206ENST00000619300 EDIL3O43854 480 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 BMP3P12645 472 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 FANCCQ00597 558 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 R3HDM1Q15032 1099 aaKnown RBP21.54■■□□□ 1.04
PSPC1-206ENST00000619300 UBE2SQ16763 222 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 RRAGBQ5VZM2 374 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 ENOX1Q8TC92 643 aaKnown RBP21.54■■□□□ 1.04
PSPC1-206ENST00000619300 XPO4Q9C0E2 1151 aaKnown RBP21.54■■□□□ 1.04
PSPC1-206ENST00000619300 MYOZ2Q9NPC6 264 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 FANCLQ9NW38 375 aa21.54■■□□□ 1.04
PSPC1-206ENST00000619300 ERCC5P28715 1186 aaPredicted RBP21.53■■□□□ 1.04
PSPC1-206ENST00000619300 MMP14P50281 582 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 NBPF9Q3BBW0 867 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 MTMR9Q96QG7 549 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 ARHGEF10LQ9HCE6 1279 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 TMEM232C9JQI7 657 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 ATP1A3P13637 1013 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 TNNI2P48788 182 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
PSPC1-206ENST00000619300 BTNL9Q6UXG8 535 aa21.53■■□□□ 1.04
PSPC1-206ENST00000619300 NAALADL2Q58DX5 795 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 SYDE2Q5VT97 1194 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 RASSF8Q8NHQ8 419 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 SGIP1Q9BQI5 828 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 BLZF1Q9H2G9 400 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 PGAP2Q9UHJ9 254 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 TMX2Q9Y320 296 aa21.52■■□□□ 1.04
PSPC1-206ENST00000619300 TECP42680 631 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
PSPC1-206ENST00000619300 CUL4BQ13620 913 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 CALCRLQ16602 461 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 PPP4R3AQ6IN85 833 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 CDAN1Q8IWY9 1227 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 AMNQ9BXJ7 453 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 ZBTB21Q9ULJ3 1066 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 OFD1O75665 1012 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 ECE1P42892 770 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 ZNF280AP59817 542 aaPredicted RBP21.51■■□□□ 1.03
PSPC1-206ENST00000619300 MIGA2Q7L4E1 593 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 CABP7Q86V35 215 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 KIAA1524Q8TCG1 905 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 PYCARDQ9ULZ3 195 aa21.51■■□□□ 1.03
PSPC1-206ENST00000619300 SHTN1A0MZ66 631 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 TDP2O95551 362 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 RPS12P25398 132 aaKnown RBP21.5■■□□□ 1.03
PSPC1-206ENST00000619300 MAP3K10Q02779 954 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 IGSF22Q8N9C0 903 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 ACER1Q8TDN7 264 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 IMPACTQ9P2X3 320 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 NFE2L3Q9Y4A8 694 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 FER1L6Q2WGJ9 1857 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 SLC37A4O43826 429 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 SERPINC1P01008 464 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 TXKP42681 527 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 NOLC1Q14978 699 aaKnown RBP eCLIP21.5■■□□□ 1.03
PSPC1-206ENST00000619300 USP17L6PQ6QN14 398 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 FILIP1Q7Z7B0 1213 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 FBXO11Q86XK2 927 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 SPICE1Q8N0Z3 855 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 CACTINQ8WUQ7 758 aaKnown RBP21.5■■□□□ 1.03
PSPC1-206ENST00000619300 MED15Q96RN5 788 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 CUEDC2Q9H467 287 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 GOPCQ9HD26 462 aa21.5■■□□□ 1.03
PSPC1-206ENST00000619300 PPP1R3GB7ZBB8 358 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 CBFA2T2O43439 604 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 CAP2P40123 477 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 FXR2P51116 673 aaKnown RBP eCLIP21.49■■□□□ 1.03
PSPC1-206ENST00000619300 UBASH3AP57075 661 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 SNAP25P60880 206 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 LRMPQ12912 555 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 KBTBD4Q9NVX7 518 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 RMND1Q9NWS8 449 aa21.49■■□□□ 1.03
PSPC1-206ENST00000619300 LTBP3Q9NS15 1303 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 RPN1P04843 607 aaKnown RBP21.48■■□□□ 1.03
PSPC1-206ENST00000619300 MYL1P05976 194 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 CD44P16070 742 aaKnown RBP21.48■■□□□ 1.03
PSPC1-206ENST00000619300 TRMT44Q8IYL2 757 aaKnown RBP21.48■■□□□ 1.03
PSPC1-206ENST00000619300 PLIN2Q99541 437 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 MAGEF1Q9HAY2 307 aa21.48■■□□□ 1.03
PSPC1-206ENST00000619300 GCFC2P16383 781 aaKnown RBP21.48■■□□□ 1.03
PSPC1-206ENST00000619300 ZNF18P17022 549 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms