RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.85
CBWD1-228ENST00000619157 TMPRSS2O15393 492 aa9.71□□□□□ -0.86
CBWD1-228ENST00000619157 MYL6BP14649 208 aa9.71□□□□□ -0.86
CBWD1-228ENST00000619157 LIG1P18858 919 aa9.71□□□□□ -0.86
CBWD1-228ENST00000619157 NGEFQ8N5V2 710 aa9.71□□□□□ -0.86
CBWD1-228ENST00000619157 WDR89Q96FK6 387 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-228ENST00000619157 LAS1LQ9Y4W2 734 aaKnown RBP9.71□□□□□ -0.86
CBWD1-228ENST00000619157 EIF2S2P20042 333 aaKnown RBP9.7□□□□□ -0.86
CBWD1-228ENST00000619157 FBLN7Q53RD9 439 aa9.7□□□□□ -0.86
CBWD1-228ENST00000619157 KSR1Q8IVT5 923 aa9.7□□□□□ -0.86
CBWD1-228ENST00000619157 PIDD1Q9HB75 910 aa9.7□□□□□ -0.86
CBWD1-228ENST00000619157 IFT57Q9NWB7 429 aa9.7□□□□□ -0.86
CBWD1-228ENST00000619157 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 ADCY9O60503 1353 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 CCDC27Q2M243 656 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 CLEC4GQ6UXB4 293 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 MAP3K15Q6ZN16 1313 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 UBN2Q6ZU65 1347 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 C8orf58Q8NAV2 365 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 PI4K2BQ8TCG2 481 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 EHD4Q9H223 541 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 DLEC1Q9Y238 1755 aa9.69□□□□□ -0.86
CBWD1-228ENST00000619157 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
CBWD1-228ENST00000619157 ATP10DQ9P241 1426 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 ABCC12Q96J65 1359 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 GRIN3BO60391 1043 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 LEFTY1O75610 366 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 ZNF157P51786 506 aaPredicted RBP9.68□□□□□ -0.86
CBWD1-228ENST00000619157 PRELPP51888 382 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
CBWD1-228ENST00000619157 TSPYL6Q8N831 410 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
CBWD1-228ENST00000619157 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 CCDC86Q9H6F5 360 aaKnown RBP9.68□□□□□ -0.86
CBWD1-228ENST00000619157 CHPF2Q9P2E5 772 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 CHD4Q14839 1912 aa9.68□□□□□ -0.86
CBWD1-228ENST00000619157 ERVV-1B6SEH8 477 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 NPHS2Q9NP85 383 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
CBWD1-228ENST00000619157 NIP7Q9Y221 180 aaKnown RBP eCLIP9.67□□□□□ -0.86
CBWD1-228ENST00000619157 NUP98P52948 1817 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 KLRG2A4D1S0 409 aaPredicted RBP9.66□□□□□ -0.86
CBWD1-228ENST00000619157 CARNS1A5YM72 827 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 ELL2O00472 640 aaPredicted RBP9.66□□□□□ -0.86
CBWD1-228ENST00000619157 HOXB7P09629 217 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 GPTP24298 496 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 GNAI1P63096 354 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 AP3B2Q13367 1082 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 AOC3Q16853 763 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 SUSD4Q5VX71 490 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 ARHGAP27Q6ZUM4 889 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 COPS6Q7L5N1 327 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 FAM9BQ8IZU0 186 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 CNBD1Q8NA66 436 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 BRIP1Q9BX63 1249 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
CBWD1-228ENST00000619157 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 VAV3Q9UKW4 847 aa9.66□□□□□ -0.86
CBWD1-228ENST00000619157 ZNF521Q96K83 1311 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 NTSR2O95665 410 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 SRGNP10124 158 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 ITPKAP23677 461 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 ID3Q02535 119 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 PRKCQQ04759 706 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
CBWD1-228ENST00000619157 DALRD3Q5D0E6 543 aaKnown RBP9.65□□□□□ -0.86
CBWD1-228ENST00000619157 KIAA0319Q5VV43 1072 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
CBWD1-228ENST00000619157 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
CBWD1-228ENST00000619157 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
CBWD1-228ENST00000619157 TMEM40Q8WWA1 233 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 ATXN3LQ9H3M9 355 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 PRDM7Q9NQW5 492 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.86
CBWD1-228ENST00000619157 IL16Q14005 1332 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 FANCIQ9NVI1 1328 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 ZNF862O60290 1169 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 RNGTTO60942 597 aaKnown RBP9.64□□□□□ -0.87
CBWD1-228ENST00000619157 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-228ENST00000619157 ITIH2P19823 946 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 ORC1Q13415 861 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 IFI16Q16666 785 aaKnown RBP9.64□□□□□ -0.87
CBWD1-228ENST00000619157 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 KIF6Q6ZMV9 814 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 SYNE4Q8N205 404 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 HRASLS5Q96KN8 279 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 SLC38A3Q99624 504 aa9.64□□□□□ -0.87
CBWD1-228ENST00000619157 PHAXQ9H814 394 aaKnown RBP9.64□□□□□ -0.87
CBWD1-228ENST00000619157 IBTKQ9P2D0 1353 aaPredicted RBP9.63□□□□□ -0.87
CBWD1-228ENST00000619157 H0YIN7 160 aa9.63□□□□□ -0.87
CBWD1-228ENST00000619157 PDE6BP35913 854 aa9.63□□□□□ -0.87
CBWD1-228ENST00000619157 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
CBWD1-228ENST00000619157 TTLL4Q14679 1199 aa9.63□□□□□ -0.87
CBWD1-228ENST00000619157 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms