RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ARHGEF18Q6ZSZ5 1173 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CCDC43Q96MW1 224 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 GPCPD1Q9NPB8 672 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CAPN7Q9Y6W3 813 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TTC41PQ6P2S7 1318 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PHF20L1A8MW92 1017 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 DENND2CQ68D51 928 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 PPP1R21Q6ZMI0 780 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 TYW1Q9NV66 732 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 ARPP21Q9UBL0 812 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 CDK13Q14004 1512 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 PPP1R7Q15435 360 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 IGSF22Q8N9C0 903 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 CCDC127Q96BQ5 260 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RAB17Q9H0T7 212 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GAS8O95995 478 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 RAB14P61106 215 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 MCTP2Q6DN12 878 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 MRRFQ96E11 262 aaKnown RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 ZHX3Q9H4I2 956 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ARL2BPQ9Y2Y0 163 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 ZNF213O14771 459 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SP100P23497 879 aaPredicted RBP3.38□□□□□ -1.87
NEB-220ENST00000618972 CATIPQ7Z7H3 387 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SALL3Q9BXA9 1300 aa3.38□□□□□ -1.87
NEB-220ENST00000618972 SFI1A8K8P3 1242 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 FYB2Q5VWT5 728 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 LDHAL6AQ6ZMR3 332 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KLC4Q9NSK0 619 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-220ENST00000618972 SNRPA1P09661 255 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 TUBA4AP68366 448 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 IL20Q9NYY1 176 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TMEM110-MUSTN1A8MSY1 372 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 HAUS4Q9H6D7 363 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 RIPOR2Q9Y4F9 1068 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SART1O43290 800 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 MSL3P1P0C860 447 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 UBA7P41226 1012 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 UBXN1Q04323 297 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 AKNAD1Q5T1N1 836 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ADALQ6DHV7 355 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TRIML1Q8N9V2 468 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 GSDMBQ8TAX9 411 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TANGO6Q9C0B7 1094 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SYNRGQ9UMZ2 1314 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 DBF4Q9UBU7 674 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 NFE2L3Q9Y4A8 694 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 C9orf84Q5VXU9 1444 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 S100A1P23297 94 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 GNAQP50148 359 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 FXR1P51114 621 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-220ENST00000618972 VPS37DQ86XT2 251 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 OR8K1Q8NGG5 319 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SERPINI1Q99574 410 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KIFC3Q9BVG8 833 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CCDC12Q8WUD4 166 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 HNRNPLLQ8WVV9 542 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 CALML4Q96GE6 196 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SCHIP1Q9P0W5 487 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 KCNV2Q8TDN2 545 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 POLR3CQ9BUI4 534 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 GREM2Q9H772 168 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 GGA2Q9UJY4 613 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 PAG1Q9NWQ8 432 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CD2APQ9Y5K6 639 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CD109Q6YHK3 1445 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 HNRNPRO43390 633 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 APOA1P02647 267 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SLC44A4Q53GD3 710 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 METTL16Q86W50 562 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 DDX21Q9NR30 783 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-220ENST00000618972 AKR1B10O60218 316 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 HNRNPH1P31943 449 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 MRPS27Q92552 414 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 MAP3K14Q99558 947 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-220ENST00000618972 GOLGA8HP0CJ92 632 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SPNS2Q8IVW8 549 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 NELFBQ8WX92 580 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 KCNK9Q9NPC2 374 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 MYO1FO00160 1098 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CDR2Q01850 454 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 IKQ13123 557 aaPredicted RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 TTC21AQ8NDW8 1320 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CALCOCO2Q13137 446 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 PTPAQ15257 358 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TRIM31Q9BZY9 425 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 HSPA9P38646 679 aaKnown RBP3.37□□□□□ -1.87
NEB-220ENST00000618972 PACS2Q86VP3 889 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 ANKRD13BQ86YJ7 626 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 LPIN2Q92539 896 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 TMEM60Q9H2L4 133 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 HAUS2Q9NVX0 235 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 NR1H3Q13133 447 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 INAQ16352 499 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 SGSM1Q2NKQ1 1148 aa3.37□□□□□ -1.87
NEB-220ENST00000618972 CTAGE3PQ8IX95 158 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms