RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FEM1BQ9UK73 627 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 NDUFB9Q9Y6M9 179 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 CHD9Q3L8U1 2897 aa5.55□□□□□ -1.52
SNCA-213ENST00000618500 TRANK1O15050 2925 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 ABHD14A-ACY1A0A1B0GW23 586 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 SRGAP3O43295 1099 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 PLCD1P51178 756 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 DYNLL1P63167 89 aaKnown RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 CBX2Q14781 532 aaPredicted RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 TLK2Q86UE8 772 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 PPM1EQ8WY54 764 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 LOXHD1Q8IVV2 1947 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 DENND4AQ7Z401 1863 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 FSD2A1L4K1 749 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 C5orf67F2Z3F1 127 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 C6orf222P0C671 652 aaPredicted RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 CPT1AP50416 773 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 RABGGTBP53611 331 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 TNFAIP2Q03169 654 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 G3BP1Q13283 466 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNCA-213ENST00000618500 TTLL4Q14679 1199 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 ZYXQ15942 572 aaKnown RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 PTPROQ16827 1216 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 SBK1Q52WX2 424 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 MTG1Q9BT17 334 aaPredicted RBP5.54□□□□□ -1.52
SNCA-213ENST00000618500 AP5M1Q9H0R1 490 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 SMC4Q9NTJ3 1288 aa5.54□□□□□ -1.52
SNCA-213ENST00000618500 MAGEB6P1A0A0J9YX57 407 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 FAM86C2PA6NEL3 165 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 ZBED4O75132 1171 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 CAND2O75155 1236 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 GNAI2P04899 355 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 PGK2P07205 417 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 IQCF3P0C7M6 154 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 ZAP70P43403 619 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 CSPP1Q1MSJ5 1256 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 GNASQ5JWF2 1037 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 TAPT1Q6NXT6 567 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 EDAQ92838 391 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 RAD9AQ99638 391 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 LAMA4Q16363 1823 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 USP17L12C9JPN9 530 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 USP17L21D6R901 530 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 WDR5P61964 334 aaKnown RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 PURAQ00577 322 aaKnown RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 CTC1Q2NKJ3 1217 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 DUSP28Q4G0W2 176 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 C12orf60Q5U649 245 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 PTCRAQ6ISU1 281 aaPredicted RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 FAM160B2Q86V87 743 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 MEIS3Q99687 375 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 ZHX1Q9UKY1 873 aaPredicted RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 RWDD3Q9Y3V2 267 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 UMODL1Q5DID0 1318 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 RAD50Q92878 1312 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 SMAD4Q13485 552 aaKnown RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 SMAD2Q15796 467 aaKnown RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 SNRNP48Q6IEG0 339 aaKnown RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 ERC1Q8IUD2 1116 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 LENG1Q96BZ8 264 aaPredicted RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 GMCL1Q96IK5 515 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 NEUROD6Q96NK8 337 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 ACAD9Q9H845 621 aa5.53□□□□□ -1.52
SNCA-213ENST00000618500 ARPP21Q9UBL0 812 aaPredicted RBP5.53□□□□□ -1.52
SNCA-213ENST00000618500 LOC730098B7Z3J9 87 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 POLR3DP05423 398 aaPredicted RBP5.52□□□□□ -1.53
SNCA-213ENST00000618500 AKR1B1P15121 316 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 MYOGP15173 224 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 NOVP48745 357 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 PLS1Q14651 629 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 OTOP2Q7RTS6 562 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
SNCA-213ENST00000618500 SSUH2Q9Y2M2 353 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 EMSYQ7Z589 1322 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 ARHGEF15O94989 841 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 GJB5O95377 273 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 EEF2P13639 858 aaKnown RBP5.52□□□□□ -1.53
SNCA-213ENST00000618500 SMPD1P17405 629 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 EDNRBP24530 442 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 NBL1P41271 181 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 RETREG2Q8NC44 543 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 EMID1Q96A84 441 aaPredicted RBP5.52□□□□□ -1.53
SNCA-213ENST00000618500 BORCS6Q96GS4 357 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 ZNF318Q5VUA4 2279 aa5.52□□□□□ -1.53
SNCA-213ENST00000618500 LINC01553A4QN01 128 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 SOWAHBA6NEL2 793 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 H3BNC9 293 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 APBB1O00213 710 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 RB1P06400 928 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 HOXD8P13378 290 aaPredicted RBP5.51□□□□□ -1.53
SNCA-213ENST00000618500 KCNJ6P48051 423 aa5.51□□□□□ -1.53
SNCA-213ENST00000618500 CDK8P49336 464 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms