RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ABCB11O95342 1321 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 FOXN1O15353 648 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 MAPK4P31152 587 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 SLC4A3P48751 1232 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 AKAP17AQ02040 695 aaKnown RBP26.18■■□□□ 1.78
CBWD3-213ENST00000618217 TRAF1Q13077 416 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 MUM1L1Q5H9M0 696 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.18■■□□□ 1.78
CBWD3-213ENST00000618217 NCAPG2Q86XI2 1143 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 CHST13Q8NET6 341 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 ZNF296Q8WUU4 475 aaPredicted RBP26.18■■□□□ 1.78
CBWD3-213ENST00000618217 GPKOWQ92917 476 aaPredicted RBP eCLIP26.18■■□□□ 1.78
CBWD3-213ENST00000618217 RNF146Q9NTX7 359 aa26.18■■□□□ 1.78
CBWD3-213ENST00000618217 ORC3Q9UBD5 711 aaPredicted RBP26.18■■□□□ 1.78
CBWD3-213ENST00000618217 OPLAHO14841 1288 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 HSPA1AP0DMV8 641 aaKnown RBP26.17■■□□□ 1.78
CBWD3-213ENST00000618217 HSPA1BP0DMV9 641 aaKnown RBP26.17■■□□□ 1.78
CBWD3-213ENST00000618217 TYW1BQ6NUM6 668 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 SHISA4Q96DD7 197 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 ARHGAP39Q9C0H5 1083 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 HOMER2Q9NSB8 354 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 BARHL2Q9NY43 387 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 STXBP3O00186 592 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 FKTNO75072 461 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 HEATR3Q7Z4Q2 680 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 DDX11Q96FC9 970 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 AIFM3Q96NN9 605 aa26.17■■□□□ 1.78
CBWD3-213ENST00000618217 PLXNB2O15031 1838 aa26.16■■□□□ 1.78
CBWD3-213ENST00000618217 hCG_1984214I3L0E3 225 aa26.16■■□□□ 1.78
CBWD3-213ENST00000618217 HSPA8P11142 646 aaKnown RBP26.16■■□□□ 1.78
CBWD3-213ENST00000618217 ZNF713Q8N859 430 aaPredicted RBP26.16■■□□□ 1.78
CBWD3-213ENST00000618217 TRIM47Q96LD4 638 aa26.16■■□□□ 1.78
CBWD3-213ENST00000618217 NFIBO00712 420 aa26.15■■□□□ 1.78
CBWD3-213ENST00000618217 GPR142Q7Z601 462 aa26.15■■□□□ 1.78
CBWD3-213ENST00000618217 ACAD9Q9H845 621 aa26.15■■□□□ 1.78
CBWD3-213ENST00000618217 FBXO40Q9UH90 709 aa26.15■■□□□ 1.78
CBWD3-213ENST00000618217 MRPL11Q9Y3B7 192 aaKnown RBP26.15■■□□□ 1.78
CBWD3-213ENST00000618217 PSMC4P43686 418 aa26.14■■□□□ 1.78
CBWD3-213ENST00000618217 HMGN5P82970 282 aaKnown RBP26.14■■□□□ 1.78
CBWD3-213ENST00000618217 RGS22Q8NE09 1264 aa26.14■■□□□ 1.78
CBWD3-213ENST00000618217 INTS4Q96HW7 963 aaKnown RBP26.14■■□□□ 1.78
CBWD3-213ENST00000618217 CASP8AP2Q9UKL3 1982 aa26.14■■□□□ 1.78
CBWD3-213ENST00000618217 RBBP6Q7Z6E9 1792 aaKnown RBP26.14■■□□□ 1.78
CBWD3-213ENST00000618217 STRNO43815 780 aa26.14■■□□□ 1.77
CBWD3-213ENST00000618217 PLEKHH3Q7Z736 793 aa26.14■■□□□ 1.77
CBWD3-213ENST00000618217 CD99L2Q8TCZ2 262 aa26.14■■□□□ 1.77
CBWD3-213ENST00000618217 PTPREP23469 700 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 FCGRTP55899 365 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 GHRHRQ02643 423 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 CCAR1Q8IX12 1150 aaKnown RBP26.13■■□□□ 1.77
CBWD3-213ENST00000618217 TBC1D5Q92609 795 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 ERO1AQ96HE7 468 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 SH3GLB2Q9NR46 395 aa26.13■■□□□ 1.77
CBWD3-213ENST00000618217 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.13■■□□□ 1.77
CBWD3-213ENST00000618217 ECM2O94769 699 aaPredicted RBP26.12■■□□□ 1.77
CBWD3-213ENST00000618217 WDR78Q5VTH9 848 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 PPP1R18Q6NYC8 613 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 ABRAQ8N0Z2 381 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 WASF1Q92558 559 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 A1CFQ9NQ94 594 aaKnown RBP26.12■■□□□ 1.77
CBWD3-213ENST00000618217 VPS54Q9P1Q0 977 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 ZNF236Q9UL36 1845 aa26.12■■□□□ 1.77
CBWD3-213ENST00000618217 FCER1AP12319 257 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 CTCFP49711 727 aaPredicted RBP26.11■■□□□ 1.77
CBWD3-213ENST00000618217 KIF22Q14807 665 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 MORN1Q5T089 497 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 ALG1Q9BT22 464 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 MAF1Q9H063 256 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 GJD2Q9UKL4 321 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 LCTP09848 1927 aa26.11■■□□□ 1.77
CBWD3-213ENST00000618217 TNPO2O14787 897 aaKnown RBP26.1■■□□□ 1.77
CBWD3-213ENST00000618217 NAPAP54920 295 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 GRB14Q14449 540 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 FAM177A1Q8N128 213 aaPredicted RBP26.1■■□□□ 1.77
CBWD3-213ENST00000618217 MMP19Q99542 508 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 GJB4Q9NTQ9 266 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 CYP39A1Q9NYL5 469 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 DNAJC25-GNG10A0A024R161 153 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 ESYT2A0FGR8 921 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 SLC15A5A6NIM6 579 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 USP6NLQ92738 828 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 ZMYND12Q9H0C1 365 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 SMC3Q9UQE7 1217 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 IVNS1ABPQ9Y6Y0 642 aa26.1■■□□□ 1.77
CBWD3-213ENST00000618217 GJB2P29033 226 aa26.09■■□□□ 1.77
CBWD3-213ENST00000618217 HSD17B4P51659 736 aa26.09■■□□□ 1.77
CBWD3-213ENST00000618217 MCF2L2Q86YR7 1114 aa26.09■■□□□ 1.77
CBWD3-213ENST00000618217 ANKRD35Q8N283 1001 aa26.09■■□□□ 1.77
CBWD3-213ENST00000618217 PSTPIP2Q9H939 334 aa26.09■■□□□ 1.77
CBWD3-213ENST00000618217 SMCO2A6NFE2 343 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 MEIS2O14770 477 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 ADORA2AP29274 412 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 LBX1P52954 281 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 RPS6P62753 249 aaKnown RBP26.08■■□□□ 1.77
CBWD3-213ENST00000618217 BAATQ14032 418 aaPredicted RBP26.08■■□□□ 1.77
CBWD3-213ENST00000618217 KCTD2Q14681 263 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 NPY5RQ15761 445 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 NSMFQ6X4W1 530 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 RNF207Q6ZRF8 634 aa26.08■■□□□ 1.77
CBWD3-213ENST00000618217 SAMD3Q8N6K7 520 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms