RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 SLC1A4P43007 532 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 ZDHHC15Q96MV8 337 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 TAB2Q9NYJ8 693 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
CIITA-212ENST00000618207 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 TCP10L2B9ZVM9 353 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 SLC15A2Q16348 729 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 STRIP1Q5VSL9 837 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 SPICE1Q8N0Z3 855 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 PRMT6Q96LA8 375 aaPredicted RBP13.98□□□□□ -0.17
CIITA-212ENST00000618207 DESI2Q9BSY9 194 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 IGKV6D-41A0A0C4DH26 115 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 MARCH6O60337 910 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 PAK1Q13153 545 aa13.98□□□□□ -0.17
CIITA-212ENST00000618207 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
CIITA-212ENST00000618207 SRCAPQ6ZRS2 3230 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 NT5C2P49902 561 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
CIITA-212ENST00000618207 CALCRLQ16602 461 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 NYAP1Q6ZVC0 841 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 YDJCA8MPS7 323 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 N4BP3O15049 544 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 ERCC3P19447 782 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 MTF1Q14872 753 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 NR1I3Q14994 352 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 USH1GQ495M9 461 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 DEFB132Q7Z7B7 95 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 BAG1Q99933 345 aaPredicted RBP13.97□□□□□ -0.17
CIITA-212ENST00000618207 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
CIITA-212ENST00000618207 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
CIITA-212ENST00000618207 ASIC1P78348 528 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 ZNF658Q5TYW1 1059 aaPredicted RBP13.96□□□□□ -0.17
CIITA-212ENST00000618207 DYMQ7RTS9 669 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 TEX2Q8IWB9 1127 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 TC2NQ8N9U0 490 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 JAG1P78504 1218 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 ICA1Q05084 483 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 RBL2Q08999 1139 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 SLFN13Q68D06 897 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 CNKSR1Q969H4 720 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 STK32BQ9NY57 414 aa13.96□□□□□ -0.17
CIITA-212ENST00000618207 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.96□□□□□ -0.17
CIITA-212ENST00000618207 A0A1B0GTH6 734 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 SNHG28P0DPA3 235 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 FCER1AP12319 257 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 NOVP48745 357 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 PDE4DQ08499 809 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 KRT31Q15323 416 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 APTXQ7Z2E3 356 aaKnown RBP13.96□□□□□ -0.18
CIITA-212ENST00000618207 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.18
CIITA-212ENST00000618207 ADD3Q9UEY8 706 aaKnown RBP13.96□□□□□ -0.18
CIITA-212ENST00000618207 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 DNAI1Q9UI46 699 aa13.96□□□□□ -0.18
CIITA-212ENST00000618207 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 EDIL3O43854 480 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 GH2P01242 217 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 FILIP1LQ4L180 1135 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 TOGARAM2Q6ZUX3 1019 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 KIF18AQ8NI77 898 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 CSRNP1Q96S65 589 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 PYM1Q9BRP8 204 aaKnown RBP13.95□□□□□ -0.18
CIITA-212ENST00000618207 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 ZBTB5O15062 677 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 CASP14P31944 242 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 ZYXQ15942 572 aaKnown RBP13.95□□□□□ -0.18
CIITA-212ENST00000618207 CDKAL1Q5VV42 579 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 CDK5RAP3Q96JB5 506 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 MMTAG2Q9BU76 263 aaKnown RBP13.95□□□□□ -0.18
CIITA-212ENST00000618207 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 PAXBP1Q9Y5B6 917 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 PCDHA1Q9Y5I3 950 aa13.95□□□□□ -0.18
CIITA-212ENST00000618207 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
CIITA-212ENST00000618207 IDEP14735 1019 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 MCM6Q14566 821 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 VEZTQ9HBM0 779 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 PLIN4Q96Q06 1357 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
CIITA-212ENST00000618207 LAD1O00515 517 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms