RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 NLGN2Q8NFZ4 835 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 SERPINA10Q9UK55 444 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 PCDHA12Q9UN75 941 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 YEATS4O95619 227 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 SRGNP10124 158 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 CPB1P15086 417 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 PGBD4Q96DM1 585 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
POLR2A-209ENST00000617998 PLCB3Q01970 1234 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 OSBPL5Q9H0X9 879 aaPredicted RBP12.13□□□□□ -0.47
POLR2A-209ENST00000617998 TNKSO95271 1327 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 MAP3K7O43318 606 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 MSCO60682 206 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 LPAR1Q92633 364 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 PHKBQ93100 1093 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 CAMK4Q16566 473 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 DPP7Q9UHL4 492 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 K7ENM7 598 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 TRAF5O00463 557 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 BNIP3LO60238 219 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 KDM3AQ9Y4C1 1321 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 RECQLP46063 649 aaPredicted RBP12.13□□□□□ -0.47
POLR2A-209ENST00000617998 FKBP1BP68106 108 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
POLR2A-209ENST00000617998 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
POLR2A-209ENST00000617998 TOPORSQ9NS56 1045 aaPredicted RBP12.13□□□□□ -0.47
POLR2A-209ENST00000617998 ZMYM4Q5VZL5 1548 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 TSPY1Q01534 308 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 C7orf61Q8IZ16 206 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 SEPT8Q92599 483 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 ZNF830Q96NB3 372 aaPredicted RBP12.12□□□□□ -0.47
POLR2A-209ENST00000617998 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
POLR2A-209ENST00000617998 NEMFO60524 1076 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
POLR2A-209ENST00000617998 TMEM169Q96HH4 297 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 ACBD3Q9H3P7 528 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 SLC28A3Q9HAS3 691 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 PHKA2P46019 1235 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
POLR2A-209ENST00000617998 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
POLR2A-209ENST00000617998 PCDHB12Q9Y5F1 795 aa12.12□□□□□ -0.47
POLR2A-209ENST00000617998 TRAPPC3O43617 180 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
POLR2A-209ENST00000617998 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 BIN1O00499 593 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 TADA2AO75478 443 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 NFKBIAP25963 317 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
POLR2A-209ENST00000617998 TAX1BP1Q86VP1 789 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
POLR2A-209ENST00000617998 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
POLR2A-209ENST00000617998 RASGRF1Q13972 1273 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 PTPROQ16827 1216 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 ABCB11O95342 1321 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 PRRG1O14668 218 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 DDAH1O94760 285 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 HOXA13P31271 388 aaPredicted RBP12.11□□□□□ -0.47
POLR2A-209ENST00000617998 KIF11P52732 1056 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 TTC38Q5R3I4 469 aa12.11□□□□□ -0.47
POLR2A-209ENST00000617998 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 STK10O94804 968 aaKnown RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 SOX10P56693 466 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 NEMP1O14524 444 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 AMHP03971 560 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 DEFB118Q96PH6 123 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 CPDO75976 1380 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 IFI16Q16666 785 aaKnown RBP12.1□□□□□ -0.47
POLR2A-209ENST00000617998 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
POLR2A-209ENST00000617998 BBS5Q8N3I7 341 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms