RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 USP17L22D6RA61 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L17D6RBQ6 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L19D6RCP7 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L20D6RJB6 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 SCG2P13521 617 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 FAM160A1Q05DH4 1040 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L24Q0WX57 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 PFKFB3Q16875 520 aaPredicted RBP23.46■■□□□ 1.35
SDHA-220ENST00000617470 PIBF1Q8WXW3 757 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 MRPS27Q92552 414 aaKnown RBP23.46■■□□□ 1.35
SDHA-220ENST00000617470 KIFC2Q96AC6 838 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 FEM1BQ9UK73 627 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 MARCKSP29966 332 aaPredicted RBP23.45■■□□□ 1.35
SDHA-220ENST00000617470 CKAP2LQ8IYA6 745 aa23.45■■□□□ 1.35
SDHA-220ENST00000617470 FMR1NBQ8N0W7 255 aaPredicted RBP23.45■■□□□ 1.35
SDHA-220ENST00000617470 CHURC1Q8WUH1 139 aa23.45■■□□□ 1.35
SDHA-220ENST00000617470 ZIC5Q96T25 663 aa23.45■■□□□ 1.35
SDHA-220ENST00000617470 CYTH3O43739 400 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 AOC2O75106 756 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 XBP1P17861 261 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 EARS2Q5JPH6 523 aaKnown RBP23.45■■□□□ 1.34
SDHA-220ENST00000617470 GPAT2Q6NUI2 795 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 TNFRSF25Q93038 417 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 LZTS2Q9BRK4 669 aa23.45■■□□□ 1.34
SDHA-220ENST00000617470 A0A1B0GVL5 298 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 FAM205CA6NFA0 338 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 BTBD19C9JJ37 291 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 PPP6R2O75170 966 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 HSPA6P17066 643 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 IRX3P78415 501 aaPredicted RBP23.44■■□□□ 1.34
SDHA-220ENST00000617470 NOGQ13253 232 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 PABPC4Q13310 644 aaKnown RBP eCLIP23.44■■□□□ 1.345e-16■■□□□ 14.4
SDHA-220ENST00000617470 CATSPERGQ6ZRH7 1159 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 CCDC73Q6ZRK6 1079 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 SLF1Q9BQI6 1058 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.44■■□□□ 1.34
SDHA-220ENST00000617470 LOC285556D6RIA3 1793 aa23.44■■□□□ 1.34
SDHA-220ENST00000617470 NDUFA8P51970 172 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 SYDE2Q5VT97 1194 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 FAM160B2Q86V87 743 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 ADAMTS3O15072 1205 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 KRT2P35908 639 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 ADGRF4Q8IZF3 695 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 PTPN18Q99952 460 aa23.43■■□□□ 1.34
SDHA-220ENST00000617470 PDHXO00330 501 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
SDHA-220ENST00000617470 SREBF2Q12772 1141 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 COG2Q14746 738 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 RILPL1Q5EBL4 403 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 HOMER1Q86YM7 354 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 PRPF38AQ8NAV1 312 aaKnown RBP23.42■■□□□ 1.34
SDHA-220ENST00000617470 PPP1R9BQ96SB3 815 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 PRR12Q9ULL5 1215 aa23.42■■□□□ 1.34
SDHA-220ENST00000617470 OSBPP22059 807 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 CMA1P23946 247 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 VEGFBP49765 207 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 SNAP25P60880 206 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 NOM1Q5C9Z4 860 aaKnown RBP23.41■■□□□ 1.34
SDHA-220ENST00000617470 BTNL9Q6UXG8 535 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 ANKRD23Q86SG2 305 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 ASCC2Q9H1I8 757 aaPredicted RBP23.41■■□□□ 1.34
SDHA-220ENST00000617470 PCDHB6Q9Y5E3 794 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 TESPA1A2RU30 521 aaPredicted RBP23.41■■□□□ 1.34
SDHA-220ENST00000617470 CCDC192P0DO97 292 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 INHBEP58166 350 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 TYRO3Q06418 890 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 SPZ1Q9BXG8 430 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 PPP1R9AQ9ULJ8 1098 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 CTDP1Q9Y5B0 961 aaPredicted RBP23.41■■□□□ 1.34
SDHA-220ENST00000617470 MRVI1Q9Y6F6 885 aa23.41■■□□□ 1.34
SDHA-220ENST00000617470 PLA2G6O60733 806 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 TYW1BQ6NUM6 668 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 SHC4Q6S5L8 630 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 ATG4CQ96DT6 458 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
SDHA-220ENST00000617470 JMJD4Q9H9V9 463 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 HOXC10Q9NYD6 342 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 IGF2BP3O00425 579 aaKnown RBP eCLIP23.4■■□□□ 1.34
SDHA-220ENST00000617470 GPKOWQ92917 476 aaPredicted RBP eCLIP23.4■■□□□ 1.34
SDHA-220ENST00000617470 RRP36Q96EU6 259 aaKnown RBP23.4■■□□□ 1.34
SDHA-220ENST00000617470 CLIC6Q96NY7 704 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 PIGSQ96S52 555 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 RIOX1Q9H6W3 641 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 PNMA3Q9UL41 463 aa23.4■■□□□ 1.34
SDHA-220ENST00000617470 CYP2C8P10632 490 aa23.39■■□□□ 1.33
SDHA-220ENST00000617470 DSG3P32926 999 aa23.39■■□□□ 1.33
SDHA-220ENST00000617470 WNT7AO00755 349 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 KINO60870 393 aaKnown RBP23.38■■□□□ 1.33
SDHA-220ENST00000617470 PFKFB1P16118 471 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 CCDC173Q0VFZ6 552 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 IFNL1Q8IU54 200 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 JMYQ8N9B5 988 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 SEC63Q9UGP8 760 aaKnown RBP23.38■■□□□ 1.33
SDHA-220ENST00000617470 HPSEQ9Y251 543 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 FAM237AA0A1B0GTK4 181 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 SPDYE16A6NNV3 312 aaPredicted RBP23.38■■□□□ 1.33
SDHA-220ENST00000617470 SMARCA1P28370 1054 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 CCDC174Q6PII3 467 aa23.38■■□□□ 1.33
SDHA-220ENST00000617470 SMCR8Q8TEV9 937 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms