RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SSUH2Q9Y2M2 353 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 PCDHA1Q9Y5I3 950 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 KIF13BQ9NQT8 1826 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 BECN2A8MW95 431 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 TDP2O95551 362 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 GNA11P29992 359 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 FAM83BQ5T0W9 1011 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 NBPF12Q5TAG4 269 aaPredicted RBP8.86□□□□□ -0.99
NEK3-207ENST00000617054 POTEDQ86YR6 584 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 SMYD4Q8IYR2 804 aaPredicted RBP8.86□□□□□ -0.99
NEK3-207ENST00000617054 MKL1Q969V6 931 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 TRIM5Q9C035 493 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 NRBP1Q9UHY1 535 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 ZBTB21Q9ULJ3 1066 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 ACTN4O43707 911 aaKnown RBP8.86□□□□□ -0.99
NEK3-207ENST00000617054 TECP42680 631 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 NT5C2P49902 561 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 ADCY7P51828 1080 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 GPATCH4Q5T3I0 446 aaKnown RBP8.86□□□□□ -0.99
NEK3-207ENST00000617054 KIFC2Q96AC6 838 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 TTC12Q9H892 705 aaPredicted RBP8.86□□□□□ -0.99
NEK3-207ENST00000617054 ANO10Q9NW15 660 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 FER1L6Q2WGJ9 1857 aa8.86□□□□□ -0.99
NEK3-207ENST00000617054 SLC37A4O43826 429 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 EPS15P42566 896 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 TXKP42681 527 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 POSTNQ15063 836 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 NONOQ15233 471 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEK3-207ENST00000617054 UVSSAQ2YD98 709 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 TRPM4Q8TD43 1214 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 TBC1D5Q92609 795 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 ZBED3Q96IU2 234 aaPredicted RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 P2RX7Q99572 595 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 PSTPIP2Q9H939 334 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 HERC5Q9UII4 1024 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 GOLGA6L19H0YKK7 550 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 FZD9O00144 591 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 BMP3P12645 472 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 CAP2P40123 477 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 DHX8Q14562 1220 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 RASSF8Q8NHQ8 419 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 DEFB129Q9H1M3 183 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 PGAP2Q9UHJ9 254 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 FAM237AA0A1B0GTK4 181 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 DDNO94850 711 aaPredicted RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 INPP5BP32019 993 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 PDE4DQ08499 809 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 ANGEL2Q5VTE6 544 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 DTHD1Q6ZMT9 781 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 ZNF579Q8NAF0 562 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 LRRC15Q8TF66 581 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 CCDC12Q8WUD4 166 aaPredicted RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 ZKSCAN4Q969J2 545 aaPredicted RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 TEPSINQ96N21 525 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 MTRQ99707 1265 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 VPS33BQ9H267 617 aa8.85□□□□□ -0.99
NEK3-207ENST00000617054 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.85□□□□□ -0.99
NEK3-207ENST00000617054 BRCA1P38398 1863 aaKnown RBP8.84□□□□□ -0.99
NEK3-207ENST00000617054 ESPNB1AK53 854 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 LMOD1P29536 600 aaPredicted RBP8.84□□□□□ -0.99
NEK3-207ENST00000617054 NLRP12P59046 1061 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 SLC30A10Q6XR72 485 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 NEK8Q86SG6 692 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 DRC7Q8IY82 874 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 TRMT44Q8IYL2 757 aaKnown RBP8.84□□□□□ -0.99
NEK3-207ENST00000617054 CEP57L1Q8IYX8 460 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 C17orf53Q8N3J3 647 aaPredicted RBP8.84□□□□□ -0.99
NEK3-207ENST00000617054 DAGLBQ8NCG7 672 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 FERMT2Q96AC1 680 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 PAGE5Q96GU1 130 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 TIGD1Q96MW7 591 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 ATP1A3P13637 1013 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 SMARCA1P28370 1054 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 TRAPPC10P48553 1259 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 ZNF341Q9BYN7 854 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 MAN1B1Q9UKM7 699 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 PRR12Q9ULL5 1215 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 MAPK8IP1Q9UQF2 711 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 PSME4Q14997 1843 aa8.84□□□□□ -0.99
NEK3-207ENST00000617054 NEMFO60524 1076 aa8.83□□□□□ -1
NEK3-207ENST00000617054 HIRAP54198 1017 aaPredicted RBP8.83□□□□□ -1
NEK3-207ENST00000617054 UBXN2AP68543 259 aa8.83□□□□□ -1
NEK3-207ENST00000617054 CUL4BQ13620 913 aa8.83□□□□□ -1
NEK3-207ENST00000617054 E2F4Q16254 413 aa8.83□□□□□ -1
NEK3-207ENST00000617054 SYDE2Q5VT97 1194 aa8.83□□□□□ -1
NEK3-207ENST00000617054 KLHL10Q6JEL2 608 aa8.83□□□□□ -1
NEK3-207ENST00000617054 KRT25Q7Z3Z0 450 aa8.83□□□□□ -1
NEK3-207ENST00000617054 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
NEK3-207ENST00000617054 DCAF4Q8WV16 495 aa8.83□□□□□ -1
NEK3-207ENST00000617054 SPON1Q9HCB6 807 aa8.83□□□□□ -1
NEK3-207ENST00000617054 TUBE1Q9UJT0 475 aa8.83□□□□□ -1
NEK3-207ENST00000617054 GREB1LQ9C091 1923 aaPredicted RBP8.83□□□□□ -1
NEK3-207ENST00000617054 POTEMA6NI47 508 aa8.83□□□□□ -1
NEK3-207ENST00000617054 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
NEK3-207ENST00000617054 STX17P56962 302 aa8.83□□□□□ -1
NEK3-207ENST00000617054 ZNF280AP59817 542 aaPredicted RBP8.83□□□□□ -1
NEK3-207ENST00000617054 IRF5Q13568 498 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms