RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 GRAPQ13588 217 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 RIMS1Q86UR5 1692 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 LCORLQ8N3X6 602 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 PPP2R2CQ9Y2T4 447 aa10.05□□□□□ -0.8
SPTBN1-207ENST00000615901 GRK7Q8WTQ7 553 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 ATP6V0A1Q93050 837 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 KCNK9Q9NPC2 374 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CEP104O60308 925 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 HAUS4Q9H6D7 363 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 HYOU1Q9Y4L1 999 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 ZEB2O60315 1214 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 GLG1Q92896 1179 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 FAM81BQ96LP2 452 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CCPG1Q9ULG6 757 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 EXOC8Q8IYI6 725 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 PKP1Q13835 747 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 FAM26FQ5R3K3 315 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 TNNI1P19237 187 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CCDC6Q16204 474 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 AOC3Q16853 763 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 KIAA0825Q8IV33 1275 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 RAB3IL1Q8TBN0 382 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 PDE6CP51160 858 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CYP2J2P51589 502 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 MNAT1P51948 309 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 ARL6IP4Q66PJ3 421 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 SMIM23A6NLE4 172 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 PRPF6O94906 941 aaKnown RBP10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 LMNB1P20700 586 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 AFAP1L2Q8N4X5 818 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
SPTBN1-207ENST00000615901 SERPINB2P05120 415 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 TRPC6Q9Y210 931 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 STAM2O75886 525 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 DENND2CQ68D51 928 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 PLA2G4DQ86XP0 818 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 SERPINB13Q9UIV8 391 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 RWDD2AQ9UIY3 292 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 CEP170BQ9Y4F5 1589 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ANAPC4Q9UJX5 808 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 SLFN14P0C7P3 912 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 LIG4P49917 911 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ALCAMQ13740 583 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 CMTR1Q8N1G2 835 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 P3H4Q92791 437 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ALAS1P13196 640 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 CYP27B1O15528 508 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ADKP55263 362 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 TFDP1Q14186 410 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 INTS8Q75QN2 995 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 POTEDQ86YR6 584 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 EFCAB8A8MWE9 144 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 TNNC2P02585 160 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 LGSNQ5TDP6 509 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 LRCH2Q5VUJ6 765 aa10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 U2AF1L4Q8WU68 220 aaKnown RBP10.03□□□□□ -0.8
SPTBN1-207ENST00000615901 LONRF3Q496Y0 759 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 LRRC8AQ8IWT6 810 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 WDR11Q9BZH6 1224 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 SEC31BQ9NQW1 1179 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 ATP2C2O75185 946 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 CIB2O75838 187 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 HPDP32754 393 aaPredicted RBP10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 BPIFB4P59827 614 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 KRT27Q7Z3Y8 459 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 RCOR1Q9UKL0 485 aa10.02□□□□□ -0.8
SPTBN1-207ENST00000615901 I3L4J1 428 aa10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 ITIH3Q06033 890 aa10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 C17orf53Q8N3J3 647 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 CCDC110Q8TBZ0 833 aa10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 DCAF4Q8WV16 495 aa10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 CDHR1Q96JP9 859 aa10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 QTRT2Q9H974 415 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-207ENST00000615901 LARSQ9P2J5 1176 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms