RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 IFT122Q9HBG6 1241 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 PLEKHG1Q9ULL1 1385 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 LDHCP07864 332 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 NPR1P16066 1061 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 UBXN1Q04323 297 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 TMC5Q6UXY8 1006 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 RTL3Q8N8U3 475 aaKnown RBP10.11□□□□□ -0.79
COL12A1-211ENST00000615798 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 WDR47O94967 919 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 GRAMD1BQ3KR37 738 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 HAUS2Q9NVX0 235 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
COL12A1-211ENST00000615798 IL9RQ01113 521 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 MFSD6Q6ZSS7 791 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 SYCE1Q8N0S2 351 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 LRRC8CQ8TDW0 803 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 TEX12Q9BXU0 123 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 ATP8B1O43520 1251 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 TUBA3CQ13748 450 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 H3BRJ5 948 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 CALML3P27482 149 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 TRIM59Q8IWR1 403 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 MYD88Q99836 296 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 PYGBP11216 843 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ART3Q13508 389 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 RHBDL2Q9NX52 303 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 BIN2Q9UBW5 565 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 FAM13AO94988 1023 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 BRD1O95696 1058 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 CUL5Q93034 780 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 KIFC2Q96AC6 838 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 FANCEQ9HB96 536 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 RRAGDQ9NQL2 400 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 CCDC194A0A1B0GVG4 234 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 TBKBP1A7MCY6 615 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 TADA3O75528 432 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 GABPAQ06546 454 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 MICALL2Q8IY33 904 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 CCDC90BQ9GZT6 254 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 COG4Q9H9E3 785 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 WARS2Q9UGM6 360 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 IL1RL1Q01638 556 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ANKRD42Q8N9B4 389 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 NFKBIL1Q9UBC1 381 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 AGTPBP1Q9UPW5 1226 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 DNAJC6O75061 913 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 S100A5P33763 92 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ADGRL3Q9HAR2 1447 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 UBA7P41226 1012 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 WBP11Q9Y2W2 641 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 GCFC2P16383 781 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ATP1A2P50993 1020 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 AK2P54819 239 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ESR2Q92731 530 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ASCC2Q9H1I8 757 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 STX18Q9P2W9 335 aaKnown RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ORC3Q9UBD5 711 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 TMED8Q6PL24 325 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-211ENST00000615798 ANO5Q75V66 913 aa10.1□□□□□ -0.79
COL12A1-211ENST00000615798 RNF17Q9BXT8 1623 aaKnown RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 TBC1D8O95759 1140 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 ABCD1P33897 745 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 GSTO1P78417 241 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 RASA3Q14644 834 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 LRRC37BQ96QE4 947 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 ASIC3Q9UHC3 531 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 TCHHQ07283 1943 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 ARID5AQ03989 594 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 AP1B1Q10567 949 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 RIOK1Q9BRS2 568 aaKnown RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 SCG2P13521 617 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 UBE3BQ7Z3V4 1068 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 ICA1LQ8NDH6 482 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 CATSPER1Q8NEC5 780 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 CHMP2BQ9UQN3 213 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 STAT6P42226 847 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 SLC12A2P55011 1212 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 STX19Q8N4C7 294 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 DACT1Q9NYF0 836 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 BCORL1Q5H9F3 1711 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 SPTLC2O15270 562 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 PUDPQ08623 228 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 TRMT10CQ7L0Y3 403 aaKnown RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 IP6K1Q92551 441 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 BIRC5O15392 142 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-211ENST00000615798 CREB3L3Q68CJ9 461 aa10.09□□□□□ -0.79
COL12A1-211ENST00000615798 PRG3Q9Y2Y8 225 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms