RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 KIF28PB7ZC32 967 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 TNPO2O14787 897 aaKnown RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 PLA2G6O60733 806 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 SCG2P13521 617 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 STAT2P52630 851 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 LARP1BQ659C4 914 aaKnown RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 KRT40Q6A162 431 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 SAMD1Q6SPF0 538 aaPredicted RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 COA7Q96BR5 231 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 C8orf76Q96K31 380 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 P2RX7Q99572 595 aaKnown RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 VPS54Q9P1Q0 977 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 KCNJ14Q9UNX9 436 aa9.28□□□□□ -0.92
PCDH9-205ENST00000614931 ZNFX1Q9P2E3 1918 aaKnown RBP9.28□□□□□ -0.92
PCDH9-205ENST00000614931 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-205ENST00000614931 FLT3LGP49771 235 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 HERVK_113P62684 666 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 IKQ13123 557 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-205ENST00000614931 RESTQ13127 1097 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 MTFR1Q15390 333 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 CATSPERGQ6ZRH7 1159 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 HEATR3Q7Z4Q2 680 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 FAM160B2Q86V87 743 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 SLAIN1Q8ND83 568 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 REPS2Q8NFH8 660 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 PXYLP1Q8TE99 480 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 KIFC2Q96AC6 838 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 ATG4CQ96DT6 458 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 RRP36Q96EU6 259 aaKnown RBP9.27□□□□□ -0.93
PCDH9-205ENST00000614931 SLF1Q9BQI6 1058 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 TANGO6Q9C0B7 1094 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 RANBP17Q9H2T7 1088 aaKnown RBP9.27□□□□□ -0.93
PCDH9-205ENST00000614931 TXNRD2Q9NNW7 524 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 RBPJLQ9UBG7 517 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 PPP1R9AQ9ULJ8 1098 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 CENPFP49454 3210 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 ZNF536O15090 1300 aa9.27□□□□□ -0.93
PCDH9-205ENST00000614931 PNMA6FA0A0J9YX94 578 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L15C9J2P7 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L13C9JLJ4 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L11C9JVI0 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L18D6R9N7 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L22D6RA61 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L17D6RBQ6 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L19D6RCP7 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L20D6RJB6 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 ZBTB5O15062 677 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 ADCY3O60266 1144 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 PEX10O60683 326 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 FLOT1O75955 427 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 F13A1P00488 732 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 ZSCAN22P10073 491 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-205ENST00000614931 DSG3P32926 999 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
PCDH9-205ENST00000614931 USP17L24Q0WX57 530 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 PRPF38BQ5VTL8 546 aaKnown RBP9.26□□□□□ -0.93
PCDH9-205ENST00000614931 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 CCDC174Q6PII3 467 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 GPRC5AQ8NFJ5 357 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 GTF3C2Q8WUA4 911 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-205ENST00000614931 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 WASF1Q92558 559 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 PHF20Q9BVI0 1012 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 BARHL2Q9NY43 387 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 GJD2Q9UKL4 321 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 PLXNB2O15031 1838 aa9.26□□□□□ -0.93
PCDH9-205ENST00000614931 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 OPLAHO14841 1288 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 MMP1P03956 469 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 GJB1P08034 283 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 CCL5P13501 91 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 ELNP15502 786 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 PDCP20941 246 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 GJA8P48165 433 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 UBXN2AP68543 259 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 NUCB2P80303 420 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 NR5A1Q13285 461 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 Q3C1V9 767 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 EARS2Q5JPH6 523 aaKnown RBP9.25□□□□□ -0.93
PCDH9-205ENST00000614931 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 TNPO1Q92973 898 aaKnown RBP9.25□□□□□ -0.93
PCDH9-205ENST00000614931 TNFRSF25Q93038 417 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 SLC38A10Q9HBR0 1119 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
PCDH9-205ENST00000614931 BIN2Q9UBW5 565 aaPredicted RBP9.25□□□□□ -0.93
PCDH9-205ENST00000614931 SEC63Q9UGP8 760 aaKnown RBP9.25□□□□□ -0.93
PCDH9-205ENST00000614931 ADAMTS5Q9UNA0 930 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 DOCK3Q8IZD9 2030 aa9.25□□□□□ -0.93
PCDH9-205ENST00000614931 PLXNA1Q9UIW2 1896 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms