RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 METTL14Q9HCE5 456 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 COPB1P53618 953 aaKnown RBP16.23■□□□□ 0.19
SNPH-203ENST00000614659 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 CCDC169A6NNP5 214 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 USH1GQ495M9 461 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 SLC16A10Q8TF71 515 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 RSPH3Q86UC2 560 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 DIP2AQ14689 1571 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 SLFN14P0C7P3 912 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 APBA1Q02410 837 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 UTP14CQ5TAP6 766 aaKnown RBP16.23■□□□□ 0.19
SNPH-203ENST00000614659 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
SNPH-203ENST00000614659 PRKAG2Q9UGJ0 569 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
SNPH-203ENST00000614659 SLC10A4Q96EP9 437 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 CLIC6Q96NY7 704 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 JPH2Q9BR39 696 aaPredicted RBP16.23■□□□□ 0.19
SNPH-203ENST00000614659 RAB17Q9H0T7 212 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 NKIRAS1Q9NYS0 192 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
SNPH-203ENST00000614659 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 CHMP2AO43633 222 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 LARGE1O95461 756 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 PTGDRQ13258 359 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 TRPC3Q13507 836 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 GLG1Q92896 1179 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 OSBP2Q969R2 916 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 SRPRBQ9Y5M8 271 aaKnown RBP16.22■□□□□ 0.19
SNPH-203ENST00000614659 KLRF2D3W0D1 207 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 GOLGA8KD6RF30 607 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 ALAS1P13196 640 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 SETDB1Q15047 1291 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 C11orf57Q6ZUT1 292 aaPredicted RBP16.22■□□□□ 0.19
SNPH-203ENST00000614659 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 AP5M1Q9H0R1 490 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 MRPL44Q9H9J2 332 aaKnown RBP16.22■□□□□ 0.19
SNPH-203ENST00000614659 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
SNPH-203ENST00000614659 USP17L8P0C7I0 530 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 DBNDD1Q9H9R9 158 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 CYP27B1O15528 508 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 TAOK1Q7L7X3 1001 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 RGS22Q8NE09 1264 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
SNPH-203ENST00000614659 DCCP43146 1447 aa16.22■□□□□ 0.19
SNPH-203ENST00000614659 MYO3AQ8NEV4 1616 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 RFX1P22670 979 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 LSM14BQ9BX40 385 aaKnown RBP16.21■□□□□ 0.19
SNPH-203ENST00000614659 PCDHB13Q9Y5F0 798 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 ZNF658Q5TYW1 1059 aaPredicted RBP16.21■□□□□ 0.19
SNPH-203ENST00000614659 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
SNPH-203ENST00000614659 TMOD1P28289 359 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 SPATS2Q86XZ4 545 aaKnown RBP16.21■□□□□ 0.19
SNPH-203ENST00000614659 ZNF354CQ86Y25 554 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 PAIP2Q9BPZ3 127 aaKnown RBP16.21■□□□□ 0.19
SNPH-203ENST00000614659 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 RWDD2AQ9UIY3 292 aa16.21■□□□□ 0.19
SNPH-203ENST00000614659 GAS7O60861 476 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 GCNT3O95395 438 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 GCFC2P16383 781 aaKnown RBP16.21■□□□□ 0.18
SNPH-203ENST00000614659 YWHAEP62258 255 aaKnown RBP16.21■□□□□ 0.18
SNPH-203ENST00000614659 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.18
SNPH-203ENST00000614659 INF2Q27J81 1249 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.18
SNPH-203ENST00000614659 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 NRBP2Q9NSY0 501 aa16.21■□□□□ 0.18
SNPH-203ENST00000614659 P4HA1P13674 534 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 CNGA1P29973 690 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 MXRA7P84157 204 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 SEPT2Q15019 361 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 PEX26Q7Z412 305 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 GPBP1Q86WP2 473 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 BZW2Q9Y6E2 419 aaKnown RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 SPATA31A1Q5TZJ5 1347 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
SNPH-203ENST00000614659 KRT5P13647 590 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 STK17AQ9UEE5 414 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 CDC23Q9UJX2 597 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 COMMD10Q9Y6G5 202 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
SNPH-203ENST00000614659 BIRC3Q13489 604 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms