RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 RCSD1Q6JBY9 416 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 MZT2AQ6P582 158 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TLDC1Q6P9B6 456 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 C16orf54Q6UWD8 224 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ARHGAP22Q7Z5H3 698 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZBTB33Q86T24 672 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF654Q8IZM8 581 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TTC39CQ8N584 583 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF784Q8NCA9 323 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 GIMAP7Q8NHV1 300 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 KLHDC4Q8TBB5 520 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ACMSDQ8TDX5 336 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 CEP95Q96GE4 821 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 PRKRIP1Q9H875 184 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 KIF9Q9HAQ2 790 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 RRAGCQ9HB90 399 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 PDRG1Q9NUG6 133 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 IL20Q9NYY1 176 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 LIMD1Q9UGP4 676 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 KIF2AO00139 706 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ERC2O15083 957 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 NEMFO60524 1076 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF254O75437 659 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 MBD4O95243 580 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 IFIT2P09913 472 aaKnown RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 SFTPCP11686 197 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 RLBP1P12271 317 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 PRKAR2BP31323 418 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 USP8P40818 1118 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 UBA7P41226 1012 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 CLCN2P51788 898 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TPD52P55327 224 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 SLC8A3P57103 927 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 CHMP4BP1P59074 171 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ROR1Q01973 937 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 GRIN2CQ14957 1233 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TTF1Q15361 905 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TUSC1Q2TAM9 212 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 Q4G0T1 1027 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZC3H12BQ5HYM0 836 aaKnown RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 KSR2Q6VAB6 950 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF280CQ8ND82 737 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ATXN2LQ8WWM7 1075 aaKnown RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 SH3KBP1Q96B97 665 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 GAS2L1Q99501 681 aaPredicted RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 MRPL9Q9BYD2 267 aaKnown RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TAOK3Q9H2K8 898 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 TNMDQ9H2S6 317 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 VCX3BQ9H321 246 aa3.41□□□□□ -1.86
CBWD3-209ENST00000614377 ZNHIT6Q9NWK9 470 aaKnown RBP3.41□□□□□ -1.86
CBWD3-209ENST00000614377 K7ENM7 598 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ADH1AP07327 375 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SKIP12755 728 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 MX2P20592 715 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ENDOUP21128 410 aaKnown RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 PDE3BQ13370 1112 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 TRIM71Q2Q1W2 868 aaKnown RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SKOR2Q2VWA4 1001 aaPredicted RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 CFAP58Q5T655 872 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ANO1Q5XXA6 986 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 LMBRD2Q68DH5 695 aaPredicted RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF449Q6P9G9 518 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SEPT14Q6ZU15 432 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 MICALCLQ6ZW33 695 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 RASGRP2Q7LDG7 609 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 HOMER1Q86YM7 354 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 PGBD3Q8N328 593 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 CCDC150Q8NCX0 1101 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ZNF397Q8NF99 534 aaPredicted RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 TRPC4APQ8TEL6 797 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 RSAD2Q8WXG1 361 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SGCDQ92629 289 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 RBM41Q96IZ5 413 aaKnown RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SYNCQ9H7C4 482 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 PLEKHA5Q9HAU0 1116 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 FANCLQ9NW38 375 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 TMED5Q9Y3A6 229 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 SNX5Q9Y5X3 404 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 GMEB1Q9Y692 573 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 ROCK1Q13464 1354 aa3.4□□□□□ -1.86
CBWD3-209ENST00000614377 RPAP1Q9BWH6 1393 aaPredicted RBP3.4□□□□□ -1.86
CBWD3-209ENST00000614377 LMTK3Q96Q04 1460 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 RIMBP3CA6NJZ7 1639 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 RIMBP3BA6NNM3 1639 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 RIMBP3Q9UFD9 1639 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 A0A087WUV0 522 aaPredicted RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 C2orf81A6NN90 581 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 M0R2C6 588 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 ABLIM1O14639 778 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 ZEB2O60315 1214 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 KPNA6O60684 536 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 RNF8O76064 485 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 IVLP07476 585 aa3.4□□□□□ -1.87
CBWD3-209ENST00000614377 RPS2P15880 293 aaKnown RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 HNRNPH1P31943 449 aaKnown RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 PURAQ00577 322 aaKnown RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 TBX2Q13207 712 aaPredicted RBP3.4□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC14Q49A88 953 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms