RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 RASSF4Q9H2L5 321 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 MYO1AQ9UBC5 1043 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 TTLL1O95922 423 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 ATP1A3P13637 1013 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 MTMR3Q13615 1198 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 SRGAP1Q7Z6B7 1085 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 IWS1Q96ST2 819 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 METTL14Q9HCE5 456 aaKnown RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 KIAA1024Q9UPX6 916 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 TMEM232C9JQI7 657 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 FOSP01100 380 aaPredicted RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 FAM196AQ6ZSG2 479 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 DDX41Q9UJV9 622 aaKnown RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 AGTPBP1Q9UPW5 1226 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 ZBTB16Q05516 673 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 CLEC4GQ6UXB4 293 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 PIGSQ96S52 555 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 KIDINS220Q9ULH0 1771 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 CDC25AP30304 524 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 GOLGA5Q8TBA6 731 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 MAK16Q9BXY0 300 aaKnown RBP15.18■□□□□ 0.02
GGA3-220ENST00000613421 ASIC3Q9UHC3 531 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 KCNK3O14649 394 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 VIMP08670 466 aaKnown RBP15.18■□□□□ 0.02
GGA3-220ENST00000613421 AMNQ9BXJ7 453 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 ABCB5Q2M3G0 1257 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 CROCCP2Q86T23 111 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 FAM178BQ8IXR5 827 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 BBOX1O75936 387 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 SERPINB2P05120 415 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 FNBP4Q8N3X1 1017 aaPredicted RBP15.18■□□□□ 0.02
GGA3-220ENST00000613421 SPTLC3Q9NUV7 552 aa15.18■□□□□ 0.02
GGA3-220ENST00000613421 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 NLRX1Q86UT6 975 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 FMR1NBQ8N0W7 255 aaPredicted RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 PLEKHA4Q9H4M7 779 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 ABCB4P21439 1286 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 PTPREP23469 700 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 PLA2G4DQ86XP0 818 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 CCDC105Q8IYK2 499 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 CCDC63Q8NA47 563 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 STK17AQ9UEE5 414 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 THRAP3Q9Y2W1 955 aaKnown RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 CYP4A11Q02928 519 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 RAB17Q9H0T7 212 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 TCP10L2B9ZVM9 353 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 NT5C2P49902 561 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 MXRA7P84157 204 aa15.17■□□□□ 0.02
GGA3-220ENST00000613421 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
GGA3-220ENST00000613421 SNAP23O00161 211 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 SRP68Q9UHB9 627 aaKnown RBP15.16■□□□□ 0.02
GGA3-220ENST00000613421 SERPINB13Q9UIV8 391 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 K7ENM7 598 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 SETDB1Q15047 1291 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 CCDC6Q16204 474 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 DGKHQ86XP1 1220 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 TEKT3Q9BXF9 490 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 RABEP2Q9H5N1 569 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 CLEC11AQ9Y240 323 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 SOWAHDA6NJG2 315 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 NOP56O00567 594 aaKnown RBP15.16■□□□□ 0.02
GGA3-220ENST00000613421 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 OTUD6AQ7L8S5 288 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 GRAPQ13588 217 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 KCTD1Q719H9 257 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 APBB1IPQ7Z5R6 666 aaPredicted RBP15.16■□□□□ 0.02
GGA3-220ENST00000613421 GRAPLQ8TC17 118 aaPredicted RBP15.16■□□□□ 0.02
GGA3-220ENST00000613421 RIC8AQ9NPQ8 531 aa15.16■□□□□ 0.02
GGA3-220ENST00000613421 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms