RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RPAP2Q8IXW5 612 aaPredicted RBP20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 FAM133AQ8N9E0 248 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 SCLYQ96I15 445 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 GNEQ9Y223 722 aaKnown RBP20.53■□□□□ 0.88
CSNK1E-215ENST00000612795 XIRP2A4UGR9 3374 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 COL4A4P53420 1690 aaPredicted RBP20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 FDX1P10109 184 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 BMP3P12645 472 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 PSMC6P62333 389 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 A1CFQ9NQ94 594 aaKnown RBP20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 SYNPO2Q9UMS6 1093 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 HCN4Q9Y3Q4 1203 aa20.52■□□□□ 0.88
CSNK1E-215ENST00000612795 GRIN2DO15399 1336 aa20.52■□□□□ 0.87
CSNK1E-215ENST00000612795 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 ERC2O15083 957 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 DYNC1LI2O43237 492 aaPredicted RBP20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 TTLL1O95922 423 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 STAT2P52630 851 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 SLFN13Q68D06 897 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 GIMAP6Q6P9H5 292 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 GMCL1P1Q8NEA9 526 aa20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 STRBPQ96SI9 672 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-215ENST00000612795 SOWAHBA6NEL2 793 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 GSG1L2A8MUP6 293 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 PRDM1O75626 825 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 CA3P07451 260 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 PFKMP08237 780 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 SMPD1P17405 629 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 PTGS1P23219 599 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 TDO2P48775 406 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 TMEM67Q5HYA8 995 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 EEPD1Q7L9B9 569 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 FBXO16Q8IX29 292 aaPredicted RBP20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 MKL1Q969V6 931 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 MTMR4Q9NYA4 1195 aa20.5■□□□□ 0.87
CSNK1E-215ENST00000612795 ALAS1P13196 640 aa20.49■□□□□ 0.87
CSNK1E-215ENST00000612795 AGBL1Q96MI9 1066 aa20.49■□□□□ 0.87
CSNK1E-215ENST00000612795 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
CSNK1E-215ENST00000612795 CERS4Q9HA82 394 aa20.49■□□□□ 0.87
CSNK1E-215ENST00000612795 RFXAPO00287 272 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 ACTN1P12814 892 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 TTLL4Q14679 1199 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 TKFCQ3LXA3 575 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 FAM160B2Q86V87 743 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 SIRT2Q8IXJ6 389 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 CHURC1Q8WUH1 139 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 TRERF1Q96PN7 1200 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 PDGFCQ9NRA1 345 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 MTCH2Q9Y6C9 303 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 TRANK1O15050 2925 aa20.48■□□□□ 0.87
CSNK1E-215ENST00000612795 PLIN4Q96Q06 1357 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 PTPRSQ13332 1948 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 APPP05067 770 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 SUPT20HL2P0C7V6 817 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 TSPY3P0CV98 308 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 TSPY8P0CW00 308 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 MS4A1P11836 297 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 IQSEC1Q6DN90 963 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 TRMT13Q9NUP7 481 aaKnown RBP20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 COG5Q9UP83 839 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 Q9Y3F1 56 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 ZNF536O15090 1300 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 TNKSO95271 1327 aa20.47■□□□□ 0.87
CSNK1E-215ENST00000612795 CYP2C9P11712 490 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 SLC1A4P43007 532 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 KIAA1211Q6ZU35 1233 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 APPBP2Q92624 585 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 SLC9A7Q96T83 725 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 LRFN3Q9BTN0 628 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 VTA1Q9NP79 307 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 DDX19BQ9UMR2 479 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 TRIP12Q14669 1992 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 SCN10AQ9Y5Y9 1956 aa20.46■□□□□ 0.87
CSNK1E-215ENST00000612795 GPAA1O43292 621 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 POU3F3P20264 500 aaPredicted RBP20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 HNRNPUQ00839 825 aaKnown RBP eCLIP20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 ARNTL2Q8WYA1 636 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 VWCEQ96DN2 955 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 EPHX3Q9H6B9 360 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 POLR3EQ9NVU0 708 aa20.45■□□□□ 0.86
CSNK1E-215ENST00000612795 GNAT2P19087 354 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 PDE4BQ07343 736 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 FAM47CQ5HY64 1035 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 TMEM31Q5JXX7 168 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
CSNK1E-215ENST00000612795 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms