RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 GPCPD1Q9NPB8 672 aa17.41■□□□□ 0.38
FDPS-221ENST00000612683 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.4■□□□□ 0.38
FDPS-221ENST00000612683 EPHB4P54760 987 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 BEX3Q00994 111 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 FPGSQ05932 587 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
FDPS-221ENST00000612683 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 TCP11L1Q9NUJ3 509 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 CYP39A1Q9NYL5 469 aa17.4■□□□□ 0.38
FDPS-221ENST00000612683 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
FDPS-221ENST00000612683 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
FDPS-221ENST00000612683 ARVCFO00192 962 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 TIMP1P01033 207 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 ICAM1P05362 532 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 CDK7P50613 346 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 SMAD3P84022 425 aaKnown RBP17.39■□□□□ 0.37
FDPS-221ENST00000612683 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 EEPD1Q7L9B9 569 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 RNPC3Q96LT9 517 aaKnown RBP17.39■□□□□ 0.37
FDPS-221ENST00000612683 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 SEMA6BQ9H3T3 888 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
FDPS-221ENST00000612683 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
FDPS-221ENST00000612683 COL6A3P12111 3177 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 DYNC1LI2O43237 492 aaPredicted RBP17.38■□□□□ 0.37
FDPS-221ENST00000612683 SDSP20132 328 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
FDPS-221ENST00000612683 AKNAD1Q5T1N1 836 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 IQSEC1Q6DN90 963 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 TTC14Q96N46 770 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 PURBQ96QR8 312 aaKnown RBP17.38■□□□□ 0.37
FDPS-221ENST00000612683 RANBP17Q9H2T7 1088 aaKnown RBP17.38■□□□□ 0.37
FDPS-221ENST00000612683 PDGFCQ9NRA1 345 aa17.38■□□□□ 0.37
FDPS-221ENST00000612683 CTAGE5O15320 804 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
FDPS-221ENST00000612683 IGHDP01880 384 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 BAATQ14032 418 aaPredicted RBP17.37■□□□□ 0.37
FDPS-221ENST00000612683 TLK2Q86UE8 772 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
FDPS-221ENST00000612683 GNEQ9Y223 722 aaKnown RBP17.37■□□□□ 0.37
FDPS-221ENST00000612683 ZNF213O14771 459 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 ZEB2O60315 1214 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 PDHBP11177 359 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
FDPS-221ENST00000612683 SMPD1P17405 629 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 NKX3-2P78367 333 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 TAPT1Q6NXT6 567 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 KIAA1211Q6ZU35 1233 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 FBXO16Q8IX29 292 aaPredicted RBP17.36■□□□□ 0.37
FDPS-221ENST00000612683 CDX2Q99626 313 aaPredicted RBP17.36■□□□□ 0.37
FDPS-221ENST00000612683 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
FDPS-221ENST00000612683 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
FDPS-221ENST00000612683 ASTN1O14525 1302 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 ZMYM6O95789 1325 aa17.36■□□□□ 0.37
FDPS-221ENST00000612683 PTPDC1A2A3K4 754 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 PTGS1P23219 599 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 FSCN1Q16658 493 aaKnown RBP17.35■□□□□ 0.37
FDPS-221ENST00000612683 CWC27Q6UX04 472 aaKnown RBP17.35■□□□□ 0.37
FDPS-221ENST00000612683 ESR2Q92731 530 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 ZKSCAN3Q9BRR0 538 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 VTA1Q9NP79 307 aa17.35■□□□□ 0.37
FDPS-221ENST00000612683 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.34■□□□□ 0.37
FDPS-221ENST00000612683 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.34■□□□□ 0.37
FDPS-221ENST00000612683 NFIBO00712 420 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 CABYRO75952 493 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 NUCB1Q02818 461 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■□□□□ 11.1
FDPS-221ENST00000612683 ITGA7Q13683 1181 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 TMEM63BQ5T3F8 832 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 TBC1D10CQ8IV04 446 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 FAM126BQ8IXS8 530 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 TMEM199Q8N511 208 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.373e-16■■■□□ 14.9
FDPS-221ENST00000612683 OSBPL3Q9H4L5 887 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 DIAPH3Q9NSV4 1193 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 PNMA2Q9UL42 364 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 Q9Y3F1 56 aa17.34■□□□□ 0.37
FDPS-221ENST00000612683 CSF2RAP15509 400 aa17.33■□□□□ 0.36
FDPS-221ENST00000612683 CALML3P27482 149 aa17.33■□□□□ 0.36
FDPS-221ENST00000612683 ALDH5A1P51649 535 aaPredicted RBP17.33■□□□□ 0.36
FDPS-221ENST00000612683 MORC4Q8TE76 937 aa17.33■□□□□ 0.36
FDPS-221ENST00000612683 TTYH1Q9H313 450 aaPredicted RBP17.33■□□□□ 0.36
FDPS-221ENST00000612683 CD4P01730 458 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 GOLGA8HP0CJ92 632 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 TMEM240Q5SV17 173 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 SLC43A3Q8NBI5 491 aa17.32■□□□□ 0.36
FDPS-221ENST00000612683 CLEC4DQ8WXI8 215 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms