RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MIGA2Q7L4E1 593 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 CCAR1Q8IX12 1150 aaKnown RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 BLIDQ8IZY5 108 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 DAGLBQ8NCG7 672 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 PIGSQ96S52 555 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 ARHGEF10LQ9HCE6 1279 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 HACL1Q9UJ83 578 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 NOL7Q9UMY1 257 aaKnown RBP10.22□□□□□ -0.77
CCDC47-207ENST00000612558 PCDHA4Q9UN74 947 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 CEP131Q9UPN4 1083 aa10.22□□□□□ -0.77
CCDC47-207ENST00000612558 PNMA6FA0A0J9YX94 578 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 F5H6K3 240 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 CAP2P40123 477 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 NAPAP54920 295 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 KLRC3Q07444 240 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 LRSAM1Q6UWE0 723 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 CCDC73Q6ZRK6 1079 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 ILDR2Q71H61 639 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 ADGRF4Q8IZF3 695 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 GMCL1Q96IK5 515 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 TEPSINQ96N21 525 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 ZMYND12Q9H0C1 365 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 DEFB129Q9H1M3 183 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 DDX19AQ9NUU7 478 aaKnown RBP10.21□□□□□ -0.78
CCDC47-207ENST00000612558 DACT1Q9NYF0 836 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 ZBTB21Q9ULJ3 1066 aa10.21□□□□□ -0.78
CCDC47-207ENST00000612558 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 RAD21O60216 631 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 NR1I2O75469 434 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 ASNSP08243 561 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 YBX3P16989 372 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC47-207ENST00000612558 CMA1P23946 247 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 GNA11P29992 359 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 TRAPPC10P48553 1259 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 AXDND1Q5T1B0 1012 aaPredicted RBP10.2□□□□□ -0.78
CCDC47-207ENST00000612558 TTBK2Q6IQ55 1244 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 APOBEC3FQ8IUX4 373 aaKnown RBP10.2□□□□□ -0.78
CCDC47-207ENST00000612558 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
CCDC47-207ENST00000612558 ZNF516Q92618 1163 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 MTMR8Q96EF0 704 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 NUP62CLQ9H1M0 184 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 JMJD4Q9H9V9 463 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 TMX2Q9Y320 296 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
CCDC47-207ENST00000612558 MORC2Q9Y6X9 1032 aaPredicted RBP10.2□□□□□ -0.78
CCDC47-207ENST00000612558 A0A1W2PRG0 241 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 ESYT2A0FGR8 921 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 SMCO2A6NFE2 343 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 M0R2N6 131 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 ZBTB5O15062 677 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 CUTAO60888 179 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 BMP15O95972 392 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 NDUFB10O96000 172 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 MARCKSP29966 332 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-207ENST00000612558 SLC16A2P36021 539 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 MRE11P49959 708 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 APLP1P51693 650 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 EARS2Q5JPH6 523 aaKnown RBP10.19□□□□□ -0.78
CCDC47-207ENST00000612558 PIK3AP1Q6ZUJ8 805 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 FSIP1Q8NA03 581 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 ENGASEQ8NFI3 743 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 HOOK2Q96ED9 719 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 RNF181Q9P0P0 153 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 SCAF8Q9UPN6 1271 aaKnown RBP10.19□□□□□ -0.78
CCDC47-207ENST00000612558 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
CCDC47-207ENST00000612558 ASTN2O75129 1339 aaPredicted RBP10.19□□□□□ -0.78
CCDC47-207ENST00000612558 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 BMP3P12645 472 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 ATP2B1P20020 1258 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 EPS15P42566 896 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 SNW1Q13573 536 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 TTC38Q5R3I4 469 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 ANGEL2Q5VTE6 544 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 DCAF15Q66K64 600 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 TNMDQ9H2S6 317 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 GOLPH3LQ9H4A5 285 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 CLSTN2Q9H4D0 955 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 SH2D4AQ9H788 454 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 GRPEL1Q9HAV7 217 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 UTRNP46939 3433 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 A0A1B0GVL5 298 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 CTAGE5O15320 804 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 CTNND1O60716 968 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 KINO60870 393 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms