RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 BACE1P56817 501 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 DGKZQ13574 1117 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 UBE2SQ16763 222 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 USH1GQ495M9 461 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 RBM43Q6ZSC3 357 aaKnown RBP14.02□□□□□ -0.16
CBWD1-220ENST00000612045 C4orf32Q8N8J7 132 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.16
CBWD1-220ENST00000612045 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 ZNF202O95125 648 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 CSRNP2Q9H175 543 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 TSPY26PQ9H489 355 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 POTECB2RU33 542 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 CTAGE5O15320 804 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 PPP1R12BO60237 982 aaPredicted RBP14.01□□□□□ -0.17
CBWD1-220ENST00000612045 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
CBWD1-220ENST00000612045 VCAM1P19320 739 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 SYKP43405 635 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 MRE11P49959 708 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 TRAF1Q13077 416 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 LETM2Q2VYF4 491 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 EAPPQ56P03 285 aaPredicted RBP14.01□□□□□ -0.17
CBWD1-220ENST00000612045 SPECC1Q5M775 1068 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
CBWD1-220ENST00000612045 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 KCNH3Q9ULD8 1083 aa14.01□□□□□ -0.17
CBWD1-220ENST00000612045 PHIPQ8WWQ0 1821 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L15C9J2P7 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L13C9JLJ4 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L11C9JVI0 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L18D6R9N7 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L22D6RA61 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L17D6RBQ6 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L19D6RCP7 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L20D6RJB6 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 TAL1P17542 331 aaPredicted RBP14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L24Q0WX57 530 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 ARL6IP4Q66PJ3 421 aaKnown RBP14□□□□□ -0.17
CBWD1-220ENST00000612045 CCDC174Q6PII3 467 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 USP17L6PQ6QN14 398 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
CBWD1-220ENST00000612045 PPP1R3FQ6ZSY5 799 aaPredicted RBP14□□□□□ -0.17
CBWD1-220ENST00000612045 PRPF38AQ8NAV1 312 aaKnown RBP14□□□□□ -0.17
CBWD1-220ENST00000612045 CDCA5Q96FF9 252 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 SLF1Q9BQI6 1058 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 FUCA2Q9BTY2 467 aa14□□□□□ -0.17
CBWD1-220ENST00000612045 VWA3AA6NCI4 1184 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 MEIS2O14770 477 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 ORC2Q13416 577 aaPredicted RBP13.99□□□□□ -0.17
CBWD1-220ENST00000612045 VGLL4Q14135 290 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 IL17AQ16552 155 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
CBWD1-220ENST00000612045 TIGD1Q96MW7 591 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 TANGO6Q9C0B7 1094 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 TMEM60Q9H2L4 133 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 RPAP3Q9H6T3 665 aaPredicted RBP13.99□□□□□ -0.17
CBWD1-220ENST00000612045 SNCAIPQ9Y6H5 919 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 WDR90Q96KV7 1748 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 C19orf81C9J6K1 198 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 LAD1O00515 517 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 OPLAHO14841 1288 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 EDIL3O43854 480 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 IREB2P48200 963 aaKnown RBP13.99□□□□□ -0.17
CBWD1-220ENST00000612045 USP49Q70CQ1 688 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 C12orf42Q96LP6 360 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 AFG3L2Q9Y4W6 797 aa13.99□□□□□ -0.17
CBWD1-220ENST00000612045 SMCHD1A6NHR9 2005 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 NEMFO60524 1076 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 FLOT1O75955 427 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 CCDC192P0DO97 292 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 HMGCS2P54868 508 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 AP3B2Q13367 1082 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 MCTP2Q6DN12 878 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 CSADQ9Y600 493 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 PAPPA2Q9BXP8 1791 aa13.98□□□□□ -0.17
CBWD1-220ENST00000612045 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 NF2P35240 595 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 LONP1P36776 959 aaKnown RBP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 PRPHP41219 470 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 DTHD1Q6ZMT9 781 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 LDHDQ86WU2 507 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 TEX2Q8IWB9 1127 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 EPSTI1Q96J88 318 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 P2RX7Q99572 595 aaKnown RBP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 ANO3Q9BYT9 981 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 SLC38A10Q9HBR0 1119 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 MRPL11Q9Y3B7 192 aaKnown RBP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 ZNF536O15090 1300 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 POLR2DO15514 142 aaKnown RBP13.97□□□□□ -0.17
CBWD1-220ENST00000612045 ICAM1P05362 532 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 TYRO3Q06418 890 aa13.97□□□□□ -0.17
CBWD1-220ENST00000612045 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms