RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.83	□□□□□ -0.36
EP400-208	ENST00000611841	C12orf60	Q5U649	245 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	FAM71B	Q8TC56	605 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	AFAP1L1	Q8TED9	768 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	ARHGEF1	Q92888	912 aa	Known RBP	12.83	□□□□□ -0.36
EP400-208	ENST00000611841	CHP1	Q99653	195 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	TCP11L1	Q9NUJ3	509 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	FAM169A	Q9Y6X4	670 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	SPATA31A5	Q5VU36	1347 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	SPATA31A7	Q8IWB4	1347 aa		12.83	□□□□□ -0.36
EP400-208	ENST00000611841	CTAGE9	A4FU28	777 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	EIF6	P56537	245 aa	Known RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SET	Q01105	290 aa	Predicted RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SPAG1	Q07617	926 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SOGA3	Q5TF21	947 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	PDXDC2P	Q6P474	469 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	RWDD2A	Q9UIY3	292 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	TFR2	Q9UP52	801 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SHANK3	Q9BYB0	1731 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841		F8W031	263 aa	Predicted RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	FGR	P09769	529 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	PARP1	P09874	1014 aa	Known RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	LONP1	P36776	959 aa	Known RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	GNAQ	P50148	359 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SRGAP1	Q7Z6B7	1085 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	DGKH	Q86XP1	1220 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	RNF217	Q8TC41	542 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	KIFC2	Q96AC6	838 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	TMEM47	Q9BQJ4	181 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	EHD4	Q9H223	541 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	ITGB4	P16144	1822 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	USP8	P40818	1118 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	TEC	P42680	631 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	SLC10A5	Q5PT55	438 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	TTC19	Q6DKK2	380 aa	Predicted RBP	12.82	□□□□□ -0.36
EP400-208	ENST00000611841	TMTC1	Q8IUR5	882 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	WDR66	Q8TBY9	1149 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	DISC1	Q9NRI5	854 aa		12.82	□□□□□ -0.36
EP400-208	ENST00000611841	EBAG9	O00559	213 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	RPS6KA4	O75676	772 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	NEBL	O76041	1014 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PMS1	P54277	932 aa	Known RBP	12.81	□□□□□ -0.36
EP400-208	ENST00000611841	ASIC1	P78348	528 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PYM1	Q9BRP8	204 aa	Known RBP	12.81	□□□□□ -0.36
EP400-208	ENST00000611841	NAA15	Q9BXJ9	866 aa	Known RBP	12.81	□□□□□ -0.36
EP400-208	ENST00000611841	DNAJC5	Q9H3Z4	198 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	BIN2	Q9UBW5	565 aa	Predicted RBP	12.81	□□□□□ -0.36
EP400-208	ENST00000611841	LUC7L2	Q9Y383	392 aa	Known RBP	12.81	□□□□□ -0.36
EP400-208	ENST00000611841	MYH2	Q9UKX2	1941 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	SMCO2	A6NFE2	343 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	ENC1	O14682	589 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PSMA7	O14818	248 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	CYTH3	O43739	400 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	TXK	P42681	527 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PICALM	Q13492	652 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	SBK1	Q52WX2	424 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	AMIGO3	Q86WK7	504 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	HPS3	Q969F9	1004 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	EYA3	Q99504	573 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	ABHD10	Q9NUJ1	306 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	TRIM10	Q9UDY6	481 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PCDHA6	Q9UN73	950 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	SAMM50	Q9Y512	469 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	PCDHA8	Q9Y5H6	950 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	CAPN7	Q9Y6W3	813 aa		12.81	□□□□□ -0.36
EP400-208	ENST00000611841	MARCH6	O60337	910 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	TRIM21	P19474	475 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	ERVK-24	P63145	666 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	PDE4D	Q08499	809 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	TMED8	Q6PL24	325 aa	Predicted RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	CYP26C1	Q6V0L0	522 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	TEX11	Q8IYF3	940 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	CSGALNACT2	Q8N6G5	542 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	CCDC148	Q8NFR7	591 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	CD248	Q9HCU0	757 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	SEC63	Q9UGP8	760 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	C6orf229	H3BNL8	230 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	UFL1	O94874	794 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	LDHC	P07864	332 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	INPP5B	P32019	993 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	MTIF2	P46199	727 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	ARL6IP4	Q66PJ3	421 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	RPGR	Q92834	1020 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	CCDC47	Q96A33	483 aa	Known RBP	12.8	□□□□□ -0.36
EP400-208	ENST00000611841	SGSM3	Q96HU1	749 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	MAD2L2	Q9UI95	211 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	MYH3	P11055	1940 aa		12.8	□□□□□ -0.36
EP400-208	ENST00000611841	TTC26	A0AVF1	554 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841		B4DLN1	442 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841		H7C1D1	291 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	MYO1F	O00160	1098 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	IDE	P14735	1019 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	BTD	P43251	543 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	TBC1D8B	Q0IIM8	1120 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	BIRC2	Q13490	618 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	TRAPPC3L	Q5T215	181 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	CABP7	Q86V35	215 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	ACBD3	Q9H3P7	528 aa		12.79	□□□□□ -0.36
EP400-208	ENST00000611841	CDC23	Q9UJX2	597 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms