RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 A0A0D9SFI3 127 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 ASTN1O14525 1302 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 SLC16A2P36021 539 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 NKX3-2P78367 333 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 HDAC1Q13547 482 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 DCAF4Q8WV16 495 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 MYLIPQ8WY64 445 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 PURBQ96QR8 312 aaKnown RBP15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 CYP39A1Q9NYL5 469 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 CCPG1Q9ULG6 757 aa15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 GNEQ9Y223 722 aaKnown RBP15.81■□□□□ 0.12
POLR2J3-219ENST00000608621 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 DYNC1LI2O43237 492 aaPredicted RBP15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 C16orf59Q7L2K0 433 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 EEPD1Q7L9B9 569 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 TMEM47Q9BQJ4 181 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 GPCPD1Q9NPB8 672 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 TCP11L1Q9NUJ3 509 aa15.8■□□□□ 0.12
POLR2J3-219ENST00000608621 TRIM6-TRIM34B2RNG4 842 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 TLR3O15455 904 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 ICAM1P05362 532 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 TOP1P11387 765 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 SMPD1P17405 629 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 PTGS1P23219 599 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 NMIQ13287 307 aaPredicted RBP15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 TMEM63BQ5T3F8 832 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 CXCL17Q6UXB2 119 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 BTNL9Q6UXG8 535 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 FAM126BQ8IXS8 530 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 PPP1R12CQ9BZL4 782 aa15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 RANBP17Q9H2T7 1088 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-219ENST00000608621 CUL9Q8IWT3 2517 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 FRMPD2Q68DX3 1309 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 CD4P01730 458 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 CSF2RAP15509 400 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 HAND2P61296 217 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 PPIGQ13427 754 aaKnown RBP eCLIP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 FSCN1Q16658 493 aaKnown RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 TMEM240Q5SV17 173 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 ZNF589Q86UQ0 364 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 TICAM2Q86XR7 235 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 FBXO16Q8IX29 292 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 TMEM199Q8N511 208 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 SLC43A3Q8NBI5 491 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 RILPL2Q969X0 211 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 LNPKQ9C0E8 428 aa15.78■□□□□ 0.12
POLR2J3-219ENST00000608621 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 CABYRO75952 493 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 ACRP10323 421 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 ITGA7Q13683 1181 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 MORC4Q8TE76 937 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 COL25A1Q9BXS0 654 aaPredicted RBP15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 Q9Y3F1 56 aa15.77■□□□□ 0.12
POLR2J3-219ENST00000608621 GRIN2DO15399 1336 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 NFIBO00712 420 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 ZEB2O60315 1214 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 DNAJB2P25686 324 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 CYP2C18P33260 490 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 AKNAD1Q5T1N1 836 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 MFSD6Q6ZSS7 791 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 TTC14Q96N46 770 aa15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
POLR2J3-219ENST00000608621 ZMYM6O95789 1325 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 GRXCR1A8MXD5 290 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 PDHBP11177 359 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 FOSL2P15408 326 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 ALDH5A1P51649 535 aaPredicted RBP15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 PSMC6P62333 389 aa15.75■□□□□ 0.11
POLR2J3-219ENST00000608621 SDSP20132 328 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 CALML3P27482 149 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 DUSP28Q4G0W2 176 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 SEZ6LQ9BYH1 1024 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms