RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 CHMP2AO43633 222 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 USO1O60763 962 aaKnown RBP7.21□□□□□ -1.25
RPF2-204ENST00000607388 ABCB4P21439 1286 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 CYP4A11Q02928 519 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 MECOMQ03112 1051 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 GFPT1Q06210 699 aaPredicted RBP7.21□□□□□ -1.25
RPF2-204ENST00000607388 GLIS3Q8NEA6 775 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 FAM76AQ8TAV0 307 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 LRRC1Q9BTT6 524 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 FOXP1Q9H334 677 aaPredicted RBP7.21□□□□□ -1.25
RPF2-204ENST00000607388 NHEJ1Q9H9Q4 299 aaPredicted RBP7.21□□□□□ -1.25
RPF2-204ENST00000607388 GPR108Q9NPR9 543 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 FAM205AQ6ZU69 1335 aa7.21□□□□□ -1.25
RPF2-204ENST00000607388 XIRP1Q702N8 1843 aaKnown RBP7.21□□□□□ -1.25
RPF2-204ENST00000607388 RCCD1A6NED2 376 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 SMCO2A6NFE2 343 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 KIAA0754O94854 1291 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 ZRANB2O95218 330 aaKnown RBP eCLIP7.21□□□□□ -1.264e-10■■■□□ 17.8
RPF2-204ENST00000607388 EIF4A3P38919 411 aaKnown RBP7.21□□□□□ -1.26
RPF2-204ENST00000607388 CACNB3P54284 484 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 UBXN2AP68543 259 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 TXNRD1Q16881 649 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 OR2W6PQ8NHA6 318 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 KIFC2Q96AC6 838 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 MRRFQ96E11 262 aaKnown RBP7.21□□□□□ -1.26
RPF2-204ENST00000607388 IL17RAQ96F46 866 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 SH2D3AQ9BRG2 576 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 AP1M1Q9BXS5 423 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 DPH5Q9H2P9 285 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 NFU1Q9UMS0 254 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 A0A1B0GTH6 734 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 KLRF2D3W0D1 207 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 LIFRP42702 1097 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 SCNN1DP51172 638 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 POLR2FP61218 127 aaKnown RBP7.21□□□□□ -1.26
RPF2-204ENST00000607388 DDB1Q16531 1140 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 BEND6Q5SZJ8 279 aaPredicted RBP7.21□□□□□ -1.26
RPF2-204ENST00000607388 SPAG5Q96R06 1193 aa7.21□□□□□ -1.26
RPF2-204ENST00000607388 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 ERVV-2B6SEH9 535 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 HIBADHP31937 336 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 ZYXQ15942 572 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 USH1GQ495M9 461 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 C8orf74Q6P047 294 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 POTEAQ6S8J7 498 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 PHLDB2Q86SQ0 1253 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CCDC25Q86WR0 208 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
RPF2-204ENST00000607388 SNX29Q8TEQ0 813 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 SHISA4Q96DD7 197 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CALML4Q96GE6 196 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 KRT12Q99456 494 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 EPB41L5Q9HCM4 733 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 ADAMTS1Q9UHI8 967 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 PXDNLA1KZ92 1463 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CPDO75976 1380 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 NPHP3-ACAD11A0A0J9YXS1 232 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 PDE2AO00408 941 aaPredicted RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 EBAG9O00559 213 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 GNPATO15228 680 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CEP104O60308 925 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 TACC1O75410 805 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CALM1P0DP23 149 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CALM2P0DP24 149 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CALM3P0DP25 149 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 COPB2P35606 906 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 BRD3Q15059 726 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 TRADDQ15628 312 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 ANKRD40Q6AI12 368 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 UBLCP1Q8WVY7 318 aaPredicted RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.261e-21■■■■□ 20.7
RPF2-204ENST00000607388 PIGSQ96S52 555 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 LBHD1Q9BQE6 289 aaPredicted RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 SELENOOQ9BVL4 669 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 PRDM16Q9HAZ2 1276 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 ZBTB21Q9ULJ3 1066 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 KIF5BP33176 963 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 SEC24CP53992 1094 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 PKN1Q16512 942 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 HERC4Q5GLZ8 1057 aaPredicted RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 FCHSD1Q86WN1 690 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 ELMO3Q96BJ8 720 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CCDC43Q96MW1 224 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 BPIFA3Q9BQP9 254 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 GGT7Q9UJ14 662 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 SCAF8Q9UPN6 1271 aaKnown RBP7.2□□□□□ -1.26
RPF2-204ENST00000607388 CAPN6Q9Y6Q1 641 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CAPN7Q9Y6W3 813 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 FMN2Q9NZ56 1722 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 WDR17Q8IZU2 1322 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 RGPD2P0DJD1 1756 aa7.2□□□□□ -1.26
RPF2-204ENST00000607388 CYP19A1P11511 503 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 ZNF18P17022 549 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 IL6STP40189 918 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 MDM2Q00987 491 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 SETQ01105 290 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 GUCY1A3Q02108 690 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms