RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SOWAHBA6NEL2 793 aa17.56■□□□□ 0.4
CTSA-216ENST00000607212 CDK7P50613 346 aa17.56■□□□□ 0.4
CTSA-216ENST00000607212 PSRC1Q6PGN9 363 aaPredicted RBP17.56■□□□□ 0.4
CTSA-216ENST00000607212 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
CTSA-216ENST00000607212 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
CTSA-216ENST00000607212 FRMPD2Q68DX3 1309 aaPredicted RBP17.55■□□□□ 0.4
CTSA-216ENST00000607212 CABYRO75952 493 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 CYP2C18P33260 490 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 FSCN1Q16658 493 aaKnown RBP17.55■□□□□ 0.4
CTSA-216ENST00000607212 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 FAM126BQ8IXS8 530 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 PPM1EQ8WY54 764 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 GAS2L1Q99501 681 aaPredicted RBP17.55■□□□□ 0.4
CTSA-216ENST00000607212 MTIF3Q9H2K0 278 aaKnown RBP17.55■□□□□ 0.4
CTSA-216ENST00000607212 ZNF576Q9H609 170 aa17.55■□□□□ 0.4
CTSA-216ENST00000607212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTSA-216ENST00000607212 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 GRXCR1A8MXD5 290 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 PLA2G6O60733 806 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 SMPD1P17405 629 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 SLC16A2P36021 539 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 TMEM240Q5SV17 173 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 KIAA1211Q6ZU35 1233 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 ZNF365Q70YC5 407 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 KATNBL1Q9H079 304 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 HIPK3Q9H422 1215 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 GPCPD1Q9NPB8 672 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 CYP39A1Q9NYL5 469 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 MSRAQ9UJ68 235 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 LRRC37A2A6NM11 1700 aa17.54■□□□□ 0.4
CTSA-216ENST00000607212 PTGS1P23219 599 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 IQSEC1Q6DN90 963 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 TTBK2Q6IQ55 1244 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 HELLSQ9NRZ9 838 aa17.53■□□□□ 0.4
CTSA-216ENST00000607212 ADD3Q9UEY8 706 aaKnown RBP17.53■□□□□ 0.4
CTSA-216ENST00000607212 ASTN1O14525 1302 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 CTAGE5O15320 804 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 ICAM1P05362 532 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 PBX2P40425 430 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 CCL23P55773 120 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 PSMC6P62333 389 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
CTSA-216ENST00000607212 PBX4Q9BYU1 374 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 VTA1Q9NP79 307 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
CTSA-216ENST00000607212 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.4
CTSA-216ENST00000607212 ORC4O43929 436 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 FGBP02675 491 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 MYL3P08590 195 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
CTSA-216ENST00000607212 CALML3P27482 149 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 HAND2P61296 217 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 MYO9BQ13459 2157 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 BAATQ14032 418 aaPredicted RBP17.51■□□□□ 0.39
CTSA-216ENST00000607212 MCMDC2Q4G0Z9 681 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
CTSA-216ENST00000607212 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
CTSA-216ENST00000607212 CUL9Q8IWT3 2517 aa17.51■□□□□ 0.39
CTSA-216ENST00000607212 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 FOXP2O15409 715 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 CD4P01730 458 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 ALDH5A1P51649 535 aaPredicted RBP17.5■□□□□ 0.39
CTSA-216ENST00000607212 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
CTSA-216ENST00000607212 RAB30Q15771 203 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 FAM47CQ5HY64 1035 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 C16orf59Q7L2K0 433 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 OTOP2Q7RTS6 562 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 OR6J1Q8NGC5 347 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
CTSA-216ENST00000607212 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 TRPV6Q9H1D0 765 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 RANBP17Q9H2T7 1088 aaKnown RBP17.5■□□□□ 0.39
CTSA-216ENST00000607212 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 ANAPC4Q9UJX5 808 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 LCTP09848 1927 aa17.5■□□□□ 0.39
CTSA-216ENST00000607212 IGFBP4P22692 258 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 PDE1AP54750 535 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 PDE4DQ08499 809 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 BRDTQ58F21 947 aaPredicted RBP17.49■□□□□ 0.39
CTSA-216ENST00000607212 TAPT1Q6NXT6 567 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 WDR11Q9BZH6 1224 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 Q9Y3F1 56 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 GBF1Q92538 1859 aa17.49■□□□□ 0.39
CTSA-216ENST00000607212 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 A0A0D9SFI3 127 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 NFIBO00712 420 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 B4GALT4O60513 344 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms